RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CATSPERZQ9NTU4 200 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 VPS51Q9UID3 782 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 SLC27A5Q9Y2P5 690 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 PLSCR1O15162 318 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 BMP10O95393 424 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 VHLP40337 213 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 HSPA13P48723 471 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 ZC3H12AQ5D1E8 599 aaKnown RBP17.62■□□□□ 0.41
SHANK1-201ENST00000293441 RGMBQ6NW40 437 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 PRR23CQ6ZRP0 262 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 PANX3Q96QZ0 392 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 ZMYM2Q9UBW7 1377 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 ZBTB14O43829 449 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 SMNDC1O75940 238 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHANK1-201ENST00000293441 FYNP06241 537 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 SSTR1P30872 391 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 ITIH4Q14624 930 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 HECTD3Q5T447 861 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 ATAD3BQ5T9A4 648 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 FIBCD1Q8N539 461 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 DUSP9Q99956 384 aaKnown RBP17.62■□□□□ 0.41
SHANK1-201ENST00000293441 BLOC1S4Q9NUP1 217 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 TAGLN3Q9UI15 199 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 RGS5O15539 181 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 TBL1XO60907 577 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 GLI1P08151 1106 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 EIF4BP23588 611 aaKnown RBP17.62■□□□□ 0.41
SHANK1-201ENST00000293441 RBL1P28749 1068 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 RIPOR1Q6ZS17 1223 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 PPP1R14AQ96A00 147 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 POMKQ9H5K3 350 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 ZFYVE1Q9HBF4 777 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 ARHGAP23Q9P227 1491 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 RIPK2O43353 540 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 NOS2P35228 1153 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 SEMA4AQ9H3S1 761 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 NPR3P17342 541 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 CD52P31358 61 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 RPL21P46778 160 aaKnown RBP17.61■□□□□ 0.41
SHANK1-201ENST00000293441 FAM183BPQ6ZVS7 135 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 HNRNPLLQ8WVV9 542 aaKnown RBP17.61■□□□□ 0.41
SHANK1-201ENST00000293441 ANKRD7Q92527 254 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 SLC35C1Q96A29 364 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 LENG9Q96B70 501 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 RHBGQ9H310 441 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 MRPS23Q9Y3D9 190 aaKnown RBP17.61■□□□□ 0.41
SHANK1-201ENST00000293441 DISP2A7MBM2 1401 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 HDCP19113 662 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 CDHR5Q9HBB8 845 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 KLHL28Q9NXS3 571 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 ENO2P09104 434 aaPredicted RBP17.61■□□□□ 0.41
SHANK1-201ENST00000293441 RARAP10276 462 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 MAD2L1Q13257 205 aaPredicted RBP17.61■□□□□ 0.41
SHANK1-201ENST00000293441 WDR59Q6PJI9 974 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 VSIG10LQ86VR7 867 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 COMMD8Q9NX08 183 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 OR12D3Q9UGF7 316 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 DDX3XO00571 662 aaKnown RBP eCLIP17.61■□□□□ 0.41
SHANK1-201ENST00000293441 PLK1P53350 603 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 MARSP56192 900 aaKnown RBP17.61■□□□□ 0.41
SHANK1-201ENST00000293441 NPNTQ6UXI9 565 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 C1orf186Q6ZWK4 172 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 CDK20Q8IZL9 346 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 OR56A4Q8NGH8 313 aa17.61■□□□□ 0.41
SHANK1-201ENST00000293441 A0A096LPK6 155 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 F8VP50 259 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 PRKAR2AP13861 404 aaKnown RBP17.6■□□□□ 0.41
SHANK1-201ENST00000293441 HNRNPCP07910 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
SHANK1-201ENST00000293441 HOXA10P31260 410 aaPredicted RBP17.6■□□□□ 0.41
SHANK1-201ENST00000293441 RBM23Q86U06 439 aaKnown RBP17.6■□□□□ 0.41
SHANK1-201ENST00000293441 WNT8BQ93098 351 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 REPS1Q96D71 796 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 CCDC154A6NI56 674 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 TNFSF9P41273 254 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 CD86P42081 329 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 SERPINH1P50454 418 aaKnown RBP17.6■□□□□ 0.41
SHANK1-201ENST00000293441 TOMM20Q15388 145 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 SPPL2AQ8TCT8 520 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 MYLPFQ96A32 169 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 PPLO60437 1756 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 FAM50BQ9Y247 325 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 KANSL1LA0AUZ9 987 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 PSMD10O75832 226 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 CALB2P22676 271 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 DEFA1P59665 94 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 DEFA3P59666 94 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 GSTA3Q16772 222 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 METTL6Q8TCB7 284 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 WDR18Q9BV38 432 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 ANKRD6Q9Y2G4 727 aa17.6■□□□□ 0.41
SHANK1-201ENST00000293441 BAZ2BQ9UIF8 2168 aaKnown RBP17.6■□□□□ 0.41
SHANK1-201ENST00000293441 CES2O00748 559 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 SLC9A3R1O14745 358 aaPredicted RBP17.59■□□□□ 0.41
SHANK1-201ENST00000293441 NOS3P29474 1203 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 ACAP1Q15027 740 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 WDR93Q6P2C0 686 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 ST3GAL5Q9UNP4 418 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 GJB1P08034 283 aa17.59■□□□□ 0.41
SHANK1-201ENST00000293441 PECAM1P16284 738 aaPredicted RBP17.59■□□□□ 0.41
SHANK1-201ENST00000293441 CASP5P51878 434 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms