RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PPARGC1AQ9UBK2 798 aaKnown RBP13.27□□□□□ -0.29
C9orf3-201ENST00000277198 ANGPTL2Q9UKU9 493 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 AP4E1Q9UPM8 1137 aa13.27□□□□□ -0.29
C9orf3-201ENST00000277198 SF3B1O75533 1304 aaKnown RBP eCLIP13.26□□□□□ -0.296e-6■■■■■ 91.8
C9orf3-201ENST00000277198 PIK3R2O00459 728 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 CAPN9O14815 690 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 DGKIO75912 1065 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 STK10O94804 968 aaKnown RBP13.26□□□□□ -0.29
C9orf3-201ENST00000277198 GRK2P25098 689 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 BCAT1P54687 386 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 AQP5P55064 265 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 GBE1Q04446 702 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 SLC10A2Q12908 348 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-201ENST00000277198 ZBTB6Q15916 424 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 TRMT10BQ6PF06 316 aaKnown RBP13.26□□□□□ -0.29
C9orf3-201ENST00000277198 MTHFD1LQ6UB35 978 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 LRRC74BQ6ZQY2 392 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 ACOT1Q86TX2 421 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 NLRP7Q8WX94 980 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 PRR11Q96HE9 360 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-201ENST00000277198 TSPAN18Q96SJ8 248 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 MRPL45Q9BRJ2 306 aaKnown RBP13.26□□□□□ -0.29
C9orf3-201ENST00000277198 MECRQ9BV79 373 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 PBX4Q9BYU1 374 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 VCXQ9H320 206 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 DHX35Q9H5Z1 703 aaKnown RBP13.26□□□□□ -0.29
C9orf3-201ENST00000277198 PCMTD2Q9NV79 361 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 MTMR10Q9NXD2 777 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 SNX9Q9Y5X1 595 aa13.26□□□□□ -0.29
C9orf3-201ENST00000277198 OPHN1O60890 802 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 TBX10O75333 385 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 CSDE1O75534 798 aaKnown RBP13.25□□□□□ -0.29
C9orf3-201ENST00000277198 CIB2O75838 187 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 KLHL2O95198 593 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 DNAJB2P25686 324 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 ARL4AP40617 200 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 SMAD3P84022 425 aaKnown RBP13.25□□□□□ -0.29
C9orf3-201ENST00000277198 NIPAL4Q0D2K0 466 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 BMPR2Q13873 1038 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 MROH9Q5TGP6 573 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 SCUBE1Q8IWY4 988 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 ADGRF2Q8IZF7 708 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 CRYBG2Q8N1P7 616 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 BEST2Q8NFU1 509 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 PIWIL2Q8TC59 973 aaKnown RBP13.25□□□□□ -0.29
C9orf3-201ENST00000277198 GUCD1Q96NT3 240 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 GPAMQ9HCL2 828 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 DTLQ9NZJ0 730 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 PLA2G4CQ9UP65 541 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 YBX2Q9Y2T7 364 aaKnown RBP13.25□□□□□ -0.29
C9orf3-201ENST00000277198 UNC80Q8N2C7 3258 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 NRCAMQ92823 1304 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 H3BRJ5 948 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 UGT1A9O60656 530 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 GABBR2O75899 941 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 KRT36O76013 467 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 PGAM1P18669 254 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 ACTR3P61158 418 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 EFHC1Q5JVL4 640 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 NCBP2-AS2Q69YL0 99 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 TREML1Q86YW5 311 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 TMEM130Q8N3G9 435 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 RBM15BQ8NDT2 890 aaKnown RBP13.25□□□□□ -0.29
C9orf3-201ENST00000277198 WDR60Q8WVS4 1066 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 DNAJB3Q8WWF6 145 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 SCG3Q8WXD2 468 aaKnown RBP13.25□□□□□ -0.29
C9orf3-201ENST00000277198 FAM167BQ9BTA0 163 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 FAM49AQ9H0Q0 323 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-201ENST00000277198 UGT1A7Q9HAW7 530 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 UGT1A10Q9HAW8 530 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 UGT1A8Q9HAW9 530 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 ARMCX1Q9P291 453 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 USP3Q9Y6I4 520 aa13.25□□□□□ -0.29
C9orf3-201ENST00000277198 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-201ENST00000277198 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-201ENST00000277198 MBLAC1A4D2B0 266 aaPredicted RBP13.24□□□□□ -0.29
C9orf3-201ENST00000277198 C2orf71A6NGG8 1288 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 CYB561D2O14569 222 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 MAP3K7O43318 606 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 NEBLO76041 1014 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 NPTXRO95502 500 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 CHRNA1P02708 482 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 CXCL10P02778 98 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 VTNP04004 478 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 GLUD2P49448 558 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 DEFB103AP81534 67 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 TMEM62Q0P6H9 643 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 THOC5Q13769 683 aaKnown RBP13.24□□□□□ -0.29
C9orf3-201ENST00000277198 GSTA3Q16772 222 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 FASTKD1Q53R41 847 aaKnown RBP13.24□□□□□ -0.29
C9orf3-201ENST00000277198 MBLAC2Q68D91 279 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 MPP5Q8N3R9 675 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 PPP1R14CQ8TAE6 165 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 SNX27Q96L92 541 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.24□□□□□ -0.29
C9orf3-201ENST00000277198 SOX13Q9UN79 622 aa13.24□□□□□ -0.29
C9orf3-201ENST00000277198 FKBP6O75344 327 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 ARHGEF15O94989 841 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 GSRP00390 522 aa13.23□□□□□ -0.29
C9orf3-201ENST00000277198 SERPINE1P05121 402 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms