RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 TMPRSS4Q9NRS4 437 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.76□□□□□ -0.37
BEST3-201ENST00000266661 COPG2Q9UBF2 871 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 ANGPTL2Q9UKU9 493 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 UBQLN1Q9UMX0 589 aaKnown RBP12.76□□□□□ -0.37
BEST3-201ENST00000266661 SOX13Q9UN79 622 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 TRIM17Q9Y577 477 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 PDCD11Q14690 1871 aaKnown RBP12.76□□□□□ -0.37
BEST3-201ENST00000266661 TSC2P49815 1807 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 TNPO2O14787 897 aaKnown RBP12.76□□□□□ -0.37
BEST3-201ENST00000266661 PPP1R12AO14974 1030 aaPredicted RBP12.76□□□□□ -0.37
BEST3-201ENST00000266661 RECQL4O94761 1208 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 MMP3P08254 477 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 KCNE1P15382 129 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 CRABP2P29373 138 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 GP5P40197 560 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 NUMBP49757 651 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 SESN2P58004 480 aaPredicted RBP12.76□□□□□ -0.37
BEST3-201ENST00000266661 PRKCZQ05513 592 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 SEMA3BQ13214 749 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 RCN2Q14257 317 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 PDK1Q15118 436 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 GLRA4Q5JXX5 417 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 SPANXN3Q5MJ09 141 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 RNF111Q6ZNA4 994 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 PIGZQ86VD9 579 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 OSTM1Q86WC4 334 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 SLC7A14Q8TBB6 771 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 NDRG1Q92597 394 aaKnown RBP12.76□□□□□ -0.37
BEST3-201ENST00000266661 RILPQ96NA2 401 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 ZNF184Q99676 751 aaPredicted RBP12.76□□□□□ -0.37
BEST3-201ENST00000266661 LBHD1Q9BQE6 289 aaPredicted RBP12.76□□□□□ -0.37
BEST3-201ENST00000266661 NXF3Q9H4D5 531 aaKnown RBP12.76□□□□□ -0.37
BEST3-201ENST00000266661 RNF19AQ9NV58 838 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 PNPOQ9NVS9 261 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 ADAM28Q9UKQ2 775 aa12.76□□□□□ -0.37
BEST3-201ENST00000266661 SMIM28A0A1B0GU29 152 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 ZCWPW2A0A1B0GU75 182 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 F5H423 210 aaPredicted RBP12.75□□□□□ -0.37
BEST3-201ENST00000266661 MAP3K7O43318 606 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 SIN3BO75182 1162 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 SMPD1P17405 629 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 NOS2P35228 1153 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 GMPRP36959 345 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 SULT1E1P49888 294 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 PDE1BQ01064 536 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 SOX4Q06945 474 aaPredicted RBP12.75□□□□□ -0.37
BEST3-201ENST00000266661 HNRNPDQ14103 355 aaKnown RBP12.75□□□□□ -0.37
BEST3-201ENST00000266661 GSTA3Q16772 222 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 GRTP1Q5TC63 336 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 KCTD11Q693B1 232 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 RFX8Q6ZV50 586 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 CLEC14AQ86T13 490 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 TMEM135Q86UB9 458 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 NETO2Q8NC67 525 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 RNF169Q8NCN4 708 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 PPFIBP2Q8ND30 876 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 KCTD13Q8WZ19 329 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 CERS2Q96G23 380 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 CPNE1Q99829 537 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 PIH1D1Q9NWS0 290 aaKnown RBP12.75□□□□□ -0.37
BEST3-201ENST00000266661 PPM1HQ9ULR3 514 aa12.75□□□□□ -0.37
BEST3-201ENST00000266661 I6L893 689 aaPredicted RBP12.74□□□□□ -0.37
BEST3-201ENST00000266661 FKBP6O75344 327 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 CIB2O75838 187 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 CD4P01730 458 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 FYNP06241 537 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 ERVK-10P10266 1014 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 DARSP14868 501 aaKnown RBP12.74□□□□□ -0.37
BEST3-201ENST00000266661 CYP2B6P20813 491 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 WARSP23381 471 aaKnown RBP12.74□□□□□ -0.37
BEST3-201ENST00000266661 MLH1P40692 756 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 ABCE1P61221 599 aaKnown RBP12.74□□□□□ -0.37
BEST3-201ENST00000266661 SLC25A3Q00325 362 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 PCBP1Q15365 356 aaKnown RBP eCLIP12.74□□□□□ -0.37
BEST3-201ENST00000266661 DUSP28Q4G0W2 176 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 UBXN11Q5T124 520 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 CASC4Q6P4E1 433 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 NOTUMQ6P988 496 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 PLD6Q8N2A8 252 aaKnown RBP12.74□□□□□ -0.37
BEST3-201ENST00000266661 PHC3Q8NDX5 983 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 ACTRT2Q8TDY3 377 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 DPF3Q92784 378 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 TSPAN18Q96SJ8 248 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 RBBP8Q99708 897 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 DUSP16Q9BY84 665 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 FAM96AQ9H5X1 160 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 CASS4Q9NQ75 786 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 SETD4Q9NVD3 440 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 ZNF358Q9NW07 568 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 PCDHB12Q9Y5F1 795 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 MBLAC1A4D2B0 266 aaPredicted RBP12.74□□□□□ -0.37
BEST3-201ENST00000266661 RRN3P2A6NIE6 340 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 G3V2L1 256 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 BEST1O76090 585 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 STK10O94804 968 aaKnown RBP12.74□□□□□ -0.37
BEST3-201ENST00000266661 POLBP06746 335 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 RALBP11234 206 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 AKAP5P24588 427 aa12.74□□□□□ -0.37
BEST3-201ENST00000266661 PTPN3P26045 913 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms