RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ZNF786Q8N393 782 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 PPM1NQ8N819 430 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 NAT8LQ8N9F0 302 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 MAPK15Q8TD08 544 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 CHURC1Q8WUH1 139 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 ATG4CQ96DT6 458 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 ZNF597Q96LX8 424 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 DMAC2Q9NW81 257 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 SCHIP1Q9P0W5 487 aaPredicted RBP8.98□□□□□ -0.97
VAPB-201ENST00000265619 TBC1D14Q9P2M4 693 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 DGKBQ9Y6T7 804 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 SCINQ9Y6U3 715 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 TANC1Q9C0D5 1861 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 CSDE1O75534 798 aaKnown RBP8.98□□□□□ -0.97
VAPB-201ENST00000265619 IL18RAPO95256 599 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 WEE2P0C1S8 567 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 GRK2P25098 689 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 POLR2BP30876 1174 aaKnown RBP8.98□□□□□ -0.97
VAPB-201ENST00000265619 MXI1P50539 228 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 NFX1Q12986 1120 aaKnown RBP8.98□□□□□ -0.97
VAPB-201ENST00000265619 SIGIRRQ6IA17 410 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 ACAD10Q6JQN1 1059 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 KRT80Q6KB66 452 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 HMBOX1Q6NT76 420 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 RALGPS2Q86X27 583 aaPredicted RBP8.98□□□□□ -0.97
VAPB-201ENST00000265619 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.98□□□□□ -0.97
VAPB-201ENST00000265619 SORT1Q99523 831 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 ACO2Q99798 780 aaKnown RBP8.98□□□□□ -0.97
VAPB-201ENST00000265619 SH3GL1Q99961 368 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 FRMD8Q9BZ67 464 aaPredicted RBP8.98□□□□□ -0.97
VAPB-201ENST00000265619 TRIT1Q9H3H1 467 aaKnown RBP8.98□□□□□ -0.97
VAPB-201ENST00000265619 STN1Q9H668 368 aaKnown RBP8.98□□□□□ -0.97
VAPB-201ENST00000265619 ELP3Q9H9T3 547 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 VPS45Q9NRW7 570 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 GMPR2Q9P2T1 348 aaKnown RBP8.98□□□□□ -0.97
VAPB-201ENST00000265619 STK39Q9UEW8 545 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 ARHGAP26Q9UNA1 814 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 COMMD10Q9Y6G5 202 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 SNCAIPQ9Y6H5 919 aa8.98□□□□□ -0.97
VAPB-201ENST00000265619 SOCS2O14508 198 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 TNPO2O14787 897 aaKnown RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 TIMM44O43615 452 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 BPGMP07738 259 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 YBX3P16989 372 aaKnown RBP eCLIP8.97□□□□□ -0.971e-7■□□□□ 9.9
VAPB-201ENST00000265619 CLK2P49760 499 aaKnown RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 TBCCQ15814 346 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 EML3Q32P44 896 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 SLC9B1Q4ZJI4 515 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 MMAAQ8IVH4 418 aaKnown RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 CTAGE3PQ8IX95 158 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 PGBD4Q96DM1 585 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 CFAP36Q96G28 342 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 PCDHAC1Q9H158 963 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 TOPORSQ9NS56 1045 aaPredicted RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 APOBEC2Q9Y235 224 aaKnown RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 TOR1BO14657 336 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 TEX28O15482 410 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 ESRRBO95718 433 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 INHBAP08476 426 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 SNHG28P0DPA3 235 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 KCNA2P16389 499 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 FKBP1AP62942 108 aaKnown RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 RACK1P63244 317 aaKnown RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 NEDD8Q15843 81 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 KLHL38Q2WGJ6 581 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 MCOLN2Q8IZK6 566 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 HCAR2Q8TDS4 363 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 TRUB1Q8WWH5 349 aaKnown RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 TP53INP1Q96A56 240 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 DOK1Q99704 481 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 CLSTN3Q9BQT9 956 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 CBWD1Q9BRT8 395 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 MROQ9BYG7 248 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 SOX17Q9H6I2 414 aaPredicted RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 TMX2Q9Y320 296 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 SQORQ9Y6N5 450 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 GOLGA8QA0A0J9YX86 632 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 GOLGA8IPA6NC78 632 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 GOLGA8OA6NCC3 632 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 GOLGA8JA6NMD2 632 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 GOLGA8NF8WBI6 632 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 DLGAP1O14490 977 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 MSI1O43347 362 aaKnown RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 HTRA2O43464 458 aaPredicted RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 B4GAT1O43505 415 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 GABBR2O75899 941 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 FGF3P11487 239 aaPredicted RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 DCKP27707 260 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 RAB15P59190 212 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 RPL7AP62424 266 aaKnown RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 CRY1Q16526 586 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 FASTKD1Q53R41 847 aaKnown RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 PIGGQ5H8A4 983 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 ZNF618Q5T7W0 954 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 CYP4A22Q5TCH4 519 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 MROH9Q5TGP6 573 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 GALNT13Q8IUC8 556 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 NATD1Q8N6N6 113 aa8.97□□□□□ -0.97
VAPB-201ENST00000265619 PIWIL2Q8TC59 973 aaKnown RBP8.97□□□□□ -0.97
VAPB-201ENST00000265619 LRRN4Q8WUT4 740 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms