RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 GRM1Q13255 1194 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 C9orf131Q5VYM1 1079 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 DCAF15Q66K64 600 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 MBLAC2Q68D91 279 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 C16orf89Q6UX73 402 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 BNC2Q6ZN30 1099 aaPredicted RBP13.43□□□□□ -0.26
NUP54-201ENST00000264883 TAS1R3Q7RTX0 852 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 LPAR1Q92633 364 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 FERMT1Q9BQL6 677 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 RPF2Q9H7B2 306 aaKnown RBP13.43□□□□□ -0.26
NUP54-201ENST00000264883 FBXO28Q9NVF7 368 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 ERGIC3Q9Y282 383 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 TTLL3Q9Y4R7 772 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 PPP2R3BQ9Y5P8 575 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 NOX1Q9Y5S8 564 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 POLR2AP24928 1970 aaKnown RBP13.43□□□□□ -0.26
NUP54-201ENST00000264883 KAT6AQ92794 2004 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 A0A087WXM4 84 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 IQCA1LA6NCM1 817 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.43□□□□□ -0.26
NUP54-201ENST00000264883 J3QRK9 145 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 KDM1AO60341 852 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 STAM2O75886 525 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 PTPN1P18031 435 aaKnown RBP13.43□□□□□ -0.26
NUP54-201ENST00000264883 BMXP51813 675 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 CAMK2BQ13554 666 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 FIBCD1Q8N539 461 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 FBXL8Q96CD0 374 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 ERLEC1Q96DZ1 483 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 CDRT15Q96T59 188 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 PDCD2LQ9BRP1 358 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 ZNF341Q9BYN7 854 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 COQ10BQ9H8M1 238 aa13.43□□□□□ -0.26
NUP54-201ENST00000264883 SIP14410 1827 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 A0A1W2PPW3 197 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 CFAP99D6REC4 459 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 H3BMQ9 156 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 APOC4-APOC2K7ER74 178 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 RNASEH2AO75792 299 aaKnown RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 APOC2P02655 101 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 C1QAP02745 245 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 ATXN3P54252 364 aaPredicted RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 ARPC4P59998 168 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 PSMC1P62191 440 aaKnown RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 RPL10AP62906 217 aaKnown RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 DPYSQ14117 519 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 SMUG1Q53HV7 270 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 TXNRD3NBQ6F5E7 133 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 LYSMD3Q7Z3D4 306 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 SETD3Q86TU7 594 aaPredicted RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 SAPCD2Q86UD0 394 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 PDCD6IPQ8WUM4 868 aaKnown RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 EFHD2Q96C19 240 aaPredicted RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 CCDC138Q96M89 665 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 COG8Q96MW5 612 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 OLFM1Q99784 485 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 UNKQ9C0B0 810 aaKnown RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 POLR3FQ9H1D9 316 aaPredicted RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 PXMP2Q9NR77 195 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 KRBA1A5PL33 1030 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 FAM47E-STBD1D6RA91 191 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 TRDMT1O14717 391 aaKnown RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 PFDN6O15212 129 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 CHADO15335 359 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 ZBTB14O43829 449 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 CST8O60676 142 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 STBD1O95210 358 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 TOP3BO95985 862 aaKnown RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 MCF2P10911 925 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 FGF3P11487 239 aaPredicted RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 CD247P20963 164 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 TKTP29401 623 aaKnown RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 CCND2P30279 289 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 GSSP48637 474 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 PCYT1AP49585 367 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 NLRP11P59045 1033 aaKnown RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 YWHAEP62258 255 aaKnown RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 MS4A2Q01362 244 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 OGDHQ02218 1023 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 SLC25A11Q02978 314 aaKnown RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 BNIP3Q12983 259 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 IKBKEQ14164 716 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 TRIM16LQ309B1 348 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 PIGGQ5H8A4 983 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 LMBRD2Q68DH5 695 aaPredicted RBP13.42□□□□□ -0.26
NUP54-201ENST00000264883 UNC45BQ8IWX7 931 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 ADGRF2Q8IZF7 708 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 MYO1HQ8N1T3 1032 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 TAMM41Q96BW9 452 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 TAAR1Q96RJ0 339 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 GABBR1Q9UBS5 961 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 AP4S1Q9Y587 144 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 NUB1Q9Y5A7 615 aa13.42□□□□□ -0.26
NUP54-201ENST00000264883 MYH9P35579 1960 aaKnown RBP13.41□□□□□ -0.26
NUP54-201ENST00000264883 AVILO75366 819 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 MYCLP12524 364 aaPredicted RBP13.41□□□□□ -0.26
NUP54-201ENST00000264883 P4HA1P13674 534 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 JAK1P23458 1154 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 GABRB3P28472 473 aa13.41□□□□□ -0.26
NUP54-201ENST00000264883 SSTR3P32745 418 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms