RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 FDFT1P37268 417 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 GRM5P41594 1212 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 GPD2P43304 727 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 SNX17Q15036 470 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 TMEM259Q4ZIN3 620 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 SPDYAQ5MJ70 313 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 PTAR1Q7Z6K3 402 aaPredicted RBP20.28■□□□□ 0.84
CSPG5-201ENST00000264723 TDRD5Q8NAT2 981 aaKnown RBP20.28■□□□□ 0.84
CSPG5-201ENST00000264723 CDC26Q8NHZ8 85 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 TRIM62Q9BVG3 475 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 WDR55Q9H6Y2 383 aaPredicted RBP20.28■□□□□ 0.84
CSPG5-201ENST00000264723 EBF2Q9HAK2 575 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 V9GYQ6 96 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 PPEF2O14830 753 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 DNAJC6O75061 913 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 LTFP02788 710 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 SERPINE1P05121 402 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 DARSP14868 501 aaKnown RBP20.28■□□□□ 0.84
CSPG5-201ENST00000264723 SLC25A11Q02978 314 aaKnown RBP20.28■□□□□ 0.84
CSPG5-201ENST00000264723 RALGPS1Q5JS13 557 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 NAPEPLDQ6IQ20 393 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 C15orf39Q6ZRI6 1047 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 DEFB128Q7Z7B8 93 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 ANKRD52Q8NB46 1076 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 BLOC1S5Q8TDH9 187 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 EME1Q96AY2 570 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 KCNK16Q96T55 309 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 LHX5Q9H2C1 402 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 RBM22Q9NW64 420 aaKnown RBP eCLIP20.28■□□□□ 0.84
CSPG5-201ENST00000264723 APPL1Q9UKG1 709 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 BTAF1O14981 1849 aa20.28■□□□□ 0.84
CSPG5-201ENST00000264723 PFDN1O60925 122 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 F9P00740 461 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.27■□□□□ 0.84
CSPG5-201ENST00000264723 PCYT2Q99447 389 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 FZD8Q9H461 694 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 SYBUQ9NX95 663 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 MFHAS1Q9Y4C4 1052 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 SLC15A5A6NIM6 579 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 PRRG1O14668 218 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 SPTLC1O15269 473 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 RAG1P15918 1043 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 IRX1P78414 480 aaPredicted RBP20.27■□□□□ 0.84
CSPG5-201ENST00000264723 GALNTL6Q49A17 601 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 SNX32Q86XE0 403 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 NT5DC4Q86YG4 428 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 PHF21BQ96EK2 531 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 LRRC40Q9H9A6 602 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 PCDHGC3Q9UN70 934 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 TYROBPO43914 113 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 NPR3P17342 541 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 GP5P40197 560 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 TCEAL1Q15170 157 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 PLEKHG4Q58EX7 1191 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 DRICH1Q6PGQ1 229 aaPredicted RBP20.27■□□□□ 0.84
CSPG5-201ENST00000264723 DDIASQ8IXT1 998 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.27■□□□□ 0.84
CSPG5-201ENST00000264723 CCDC185Q8N715 623 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 BRI3BPQ8WY22 251 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 PTPRHQ9HD43 1115 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 ZNF112Q9UJU3 913 aa20.27■□□□□ 0.84
CSPG5-201ENST00000264723 C2CD4BA6NLJ0 364 aa20.27■□□□□ 0.83
CSPG5-201ENST00000264723 GFAPP14136 432 aa20.27■□□□□ 0.83
CSPG5-201ENST00000264723 LMO2P25791 158 aa20.27■□□□□ 0.83
CSPG5-201ENST00000264723 EPHA3P29320 983 aa20.27■□□□□ 0.83
CSPG5-201ENST00000264723 COL16A1Q07092 1604 aaPredicted RBP20.27■□□□□ 0.83
CSPG5-201ENST00000264723 CCDC15Q0P6D6 951 aa20.27■□□□□ 0.83
CSPG5-201ENST00000264723 TWF1Q12792 350 aa20.27■□□□□ 0.83
CSPG5-201ENST00000264723 GDPD5Q8WTR4 605 aa20.27■□□□□ 0.83
CSPG5-201ENST00000264723 STARD7Q9NQZ5 370 aa20.27■□□□□ 0.83
CSPG5-201ENST00000264723 DTNAQ9Y4J8 743 aa20.27■□□□□ 0.83
CSPG5-201ENST00000264723 SLC12A8A0AV02 714 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 XPO1O14980 1071 aaKnown RBP20.26■□□□□ 0.83
CSPG5-201ENST00000264723 VAPBO95292 243 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 ANPEPP15144 967 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 MRPS22P82650 360 aaKnown RBP20.26■□□□□ 0.83
CSPG5-201ENST00000264723 DLG2Q15700 870 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 NOL9Q5SY16 702 aaKnown RBP20.26■□□□□ 0.83
CSPG5-201ENST00000264723 P2RY11Q96G91 374 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 CDRT15Q96T59 188 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 TCF7L2Q9NQB0 619 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 IPPQ9Y573 584 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 STRCQ7RTU9 1775 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 TRDMT1O14717 391 aaKnown RBP20.26■□□□□ 0.83
CSPG5-201ENST00000264723 BPGMP07738 259 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 ITGA2BP08514 1039 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 CCL14Q16627 93 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 RARS2Q5T160 578 aaKnown RBP20.26■□□□□ 0.83
CSPG5-201ENST00000264723 C9orf57Q5W0N0 161 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 ILDR2Q71H61 639 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 SHCBP1Q8NEM2 672 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 SH3GL3Q99963 347 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 SIX4Q9UIU6 781 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 MYO18AQ92614 2054 aaKnown RBP20.26■□□□□ 0.83
CSPG5-201ENST00000264723 RNF103-CHMP3A0A140T963 221 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 E5RI56 91 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 CASQ2O14958 399 aaPredicted RBP20.26■□□□□ 0.83
CSPG5-201ENST00000264723 PEX1O43933 1283 aa20.26■□□□□ 0.83
CSPG5-201ENST00000264723 FOXD4Q12950 439 aaPredicted RBP20.26■□□□□ 0.83
CSPG5-201ENST00000264723 ACAP1Q15027 740 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms