RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 FICDQ9BVA6 458 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 CPA3P15088 417 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 STK4Q13043 487 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 BMPR2Q13873 1038 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 ZSWIM2Q8NEG5 633 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 COPS5Q92905 334 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 ARMC7Q9H6L4 198 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 EXTL3O43909 919 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 HIRAP54198 1017 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-202ENST00000262676 WDR60Q8WVS4 1066 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 MTFMTQ96DP5 389 aaKnown RBP13.11□□□□□ -0.31
TTC39A-202ENST00000262676 PLEKHG4BQ96PX9 1271 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 MLPHQ9BV36 600 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-202ENST00000262676 TRIM9Q9C026 710 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 OSGEPL1Q9H4B0 414 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 DDX4Q9NQI0 724 aaKnown RBP13.11□□□□□ -0.31
TTC39A-202ENST00000262676 DPP7Q9UHL4 492 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 DCCP43146 1447 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 AP3D1O14617 1153 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 HNMTP50135 292 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 LSM3P62310 102 aaKnown RBP13.11□□□□□ -0.31
TTC39A-202ENST00000262676 POU5F1Q01860 360 aaKnown RBP13.11□□□□□ -0.31
TTC39A-202ENST00000262676 ZNF484Q5JVG2 852 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 ERMARDQ5T6L9 678 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 FBXO42Q6P3S6 717 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 FOXR1Q6PIV2 292 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 PTAR1Q7Z6K3 402 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-202ENST00000262676 PARP8Q8N3A8 854 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 ATP6V0D2Q8N8Y2 350 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 TC2NQ8N9U0 490 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 TPCN2Q8NHX9 752 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 OSCP1Q8WVF1 389 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 C1orf50Q9BV19 199 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 CLPBQ9H078 707 aa13.11□□□□□ -0.31
TTC39A-202ENST00000262676 SDR42E2A6NKP2 422 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 KPNA6O60684 536 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 LDLRP01130 860 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 TOMM20Q15388 145 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 NRF1Q16656 503 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 TMEM63BQ5T3F8 832 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 FAM20CQ8IXL6 584 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 GPAMQ9HCL2 828 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 RAD54BQ9Y620 910 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 O00370 1275 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 MTSS1O43312 755 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 PCDH8O95206 1070 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 STAT5AP42229 794 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 ADSSL1Q8N142 457 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 CCDC185Q8N715 623 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 POC5Q8NA72 575 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 EEF1AKMT1Q8WVE0 214 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 PABPC3Q9H361 631 aaKnown RBP13.1□□□□□ -0.31
TTC39A-202ENST00000262676 SNTG2Q9NY99 539 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.1□□□□□ -0.31
TTC39A-202ENST00000262676 CROTQ9UKG9 612 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 ARF3P61204 181 aaPredicted RBP13.1□□□□□ -0.31
TTC39A-202ENST00000262676 ARF1P84077 181 aaKnown RBP13.1□□□□□ -0.31
TTC39A-202ENST00000262676 SPACA7Q96KW9 195 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 NEUROD4Q9HD90 331 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 FBXO10Q9UK96 956 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 UBE2QL1A1L167 161 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 RGS21Q2M5E4 152 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 GPR142Q7Z601 462 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 ADGRA1Q86SQ6 560 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 FAM172AQ8WUF8 416 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 PPP1R14BQ96C90 147 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 BHLHE41Q9C0J9 482 aaPredicted RBP13.1□□□□□ -0.31
TTC39A-202ENST00000262676 PCDHB2Q9Y5E7 798 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 GMEB1Q9Y692 573 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 ZNF609O15014 1411 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 MROH7Q68CQ1 1323 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 KIAA0391O15091 583 aaKnown RBP13.1□□□□□ -0.31
TTC39A-202ENST00000262676 FGFR1P11362 822 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 FASTKQ14296 549 aaKnown RBP13.1□□□□□ -0.31
TTC39A-202ENST00000262676 QPRTQ15274 297 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 TRMT5Q32P41 509 aaKnown RBP13.1□□□□□ -0.31
TTC39A-202ENST00000262676 SETD9Q8NE22 299 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 BTBD10Q9BSF8 475 aa13.1□□□□□ -0.31
TTC39A-202ENST00000262676 AAR2Q9Y312 384 aaKnown RBP13.1□□□□□ -0.31
TTC39A-202ENST00000262676 UNC13BO14795 1591 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 PLOD3O60568 738 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 ZNF697Q5TEC3 545 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 ACAD10Q6JQN1 1059 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 DLK2Q6UY11 383 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 DNAJC14Q6Y2X3 702 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-202ENST00000262676 FNDC5Q8NAU1 212 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 RPRD1AQ96P16 312 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-202ENST00000262676 MYMKA6NI61 221 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 PSMD12O00232 456 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-202ENST00000262676 IL1R1P14778 569 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 EXOSC10Q01780 885 aaKnown RBP13.09□□□□□ -0.31
TTC39A-202ENST00000262676 TCEAL5Q5H9L2 206 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 PACS2Q86VP3 889 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 PSMA8Q8TAA3 256 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 ANKS1AQ92625 1134 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 ADAM2Q99965 735 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 TBCDQ9BTW9 1192 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 MIR1-1HGQ9H1L0 117 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 TMEM8AQ9HCN3 771 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms