RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 ETNK2Q9NVF9 386 aa12.48□□□□□ -0.41
NIP7-201ENST00000254940 GOLGA6AQ9NYA3 693 aa12.48□□□□□ -0.41
NIP7-201ENST00000254940 NEU2Q9Y3R4 380 aa12.48□□□□□ -0.41
NIP7-201ENST00000254940 HELZP42694 1942 aaKnown RBP12.47□□□□□ -0.41
NIP7-201ENST00000254940 NUP205Q92621 2012 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 C2CD4DB7Z1M9 353 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 PTPN9P43378 593 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 SLCO1A2P46721 670 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 PSEN1P49768 467 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 OTUD4Q01804 1114 aaKnown RBP12.47□□□□□ -0.41
NIP7-201ENST00000254940 BYSLQ13895 437 aaKnown RBP12.47□□□□□ -0.41
NIP7-201ENST00000254940 NADSYN1Q6IA69 706 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 SCML4Q8N228 414 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 MREGQ8N565 214 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 GOLGA6L1Q8N7Z2 621 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 ATL2Q8NHH9 583 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 ACTL9Q8TC94 416 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 ART4Q93070 314 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 NT5C3BQ969T7 300 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 TXLNGYQ9BZA5 131 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 ACBD3Q9H3P7 528 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.47□□□□□ -0.41
NIP7-201ENST00000254940 COMMD8Q9NX08 183 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 LIMD1Q9UGP4 676 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 VANGL2Q9ULK5 521 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 KIF26AQ9ULI4 1882 aaPredicted RBP12.47□□□□□ -0.41
NIP7-201ENST00000254940 F5H423 210 aaPredicted RBP12.47□□□□□ -0.41
NIP7-201ENST00000254940 GOLGA8MH3BSY2 632 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 DPYSL4O14531 572 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 SLC6A4P31645 630 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 HPDP32754 393 aaPredicted RBP12.47□□□□□ -0.41
NIP7-201ENST00000254940 CDH6P55285 790 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 GABPB1Q06547 395 aaPredicted RBP12.47□□□□□ -0.41
NIP7-201ENST00000254940 CCNG2Q16589 344 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 PIK3R6Q5UE93 754 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 C1orf228Q6PIY5 440 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 ZNF771Q7L3S4 317 aaPredicted RBP12.47□□□□□ -0.41
NIP7-201ENST00000254940 ZC3H18Q86VM9 953 aaKnown RBP12.47□□□□□ -0.41
NIP7-201ENST00000254940 OVCA2Q8WZ82 227 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 ASIC4Q96FT7 647 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 RBM41Q96IZ5 413 aaKnown RBP12.47□□□□□ -0.41
NIP7-201ENST00000254940 SERPINB11Q96P15 392 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 MPP6Q9NZW5 540 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 AGO1Q9UL18 857 aaKnown RBP12.47□□□□□ -0.41
NIP7-201ENST00000254940 AP4E1Q9UPM8 1137 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 SH3BP1Q9Y3L3 701 aa12.47□□□□□ -0.41
NIP7-201ENST00000254940 BANF1O75531 89 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 PIAS1O75925 651 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 TJP3O95049 919 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 ACSL3O95573 720 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 IGLV3-25P01717 112 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 WEE1P30291 646 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 GBP1P32455 592 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 PMS2P54278 862 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 COL19A1Q14993 1142 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 TRIP4Q15650 581 aaPredicted RBP12.46□□□□□ -0.41
NIP7-201ENST00000254940 P3H1Q32P28 736 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 SNX30Q5VWJ9 437 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 ALS2CLQ60I27 953 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 NAIF1Q69YI7 327 aaPredicted RBP12.46□□□□□ -0.41
NIP7-201ENST00000254940 GPR153Q6NV75 609 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 RWDD4Q6NW29 188 aaKnown RBP12.46□□□□□ -0.41
NIP7-201ENST00000254940 MSANTD2Q6P1R3 559 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 CENPIQ92674 756 aaPredicted RBP12.46□□□□□ -0.41
NIP7-201ENST00000254940 KCTD15Q96SI1 283 aaPredicted RBP12.46□□□□□ -0.41
NIP7-201ENST00000254940 CDH7Q9ULB5 785 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 HS3ST4Q9Y661 456 aa12.46□□□□□ -0.41
NIP7-201ENST00000254940 COL4A3Q01955 1670 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 TLDC2A0PJX2 215 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 HEPACAM2A8MVW5 462 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 PPFIA2O75334 1257 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 LAMP2P13473 410 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 ADRA1BP35368 520 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 SCNN1AP37088 669 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 CXCR3P49682 368 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 PPP2R5EQ16537 467 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 LRRC38Q5VT99 294 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 RFX6Q8HWS3 928 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 FNIP1Q8TF40 1166 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 CEP295NLQ96MC4 621 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 ASB16Q96NS5 453 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 OLA1Q9NTK5 396 aaKnown RBP12.46□□□□□ -0.42
NIP7-201ENST00000254940 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.46□□□□□ -0.42
NIP7-201ENST00000254940 TLR6Q9Y2C9 796 aa12.46□□□□□ -0.42
NIP7-201ENST00000254940 SGK1O00141 431 aa12.45□□□□□ -0.42
NIP7-201ENST00000254940 APOEP02649 317 aa12.45□□□□□ -0.42
NIP7-201ENST00000254940 ARSAP15289 507 aa12.45□□□□□ -0.42
NIP7-201ENST00000254940 GOT1P17174 413 aa12.45□□□□□ -0.42
NIP7-201ENST00000254940 CCR1P32246 355 aa12.45□□□□□ -0.42
NIP7-201ENST00000254940 MTHFRP42898 656 aa12.45□□□□□ -0.42
NIP7-201ENST00000254940 ARSEP51690 589 aa12.45□□□□□ -0.42
NIP7-201ENST00000254940 DRG2P55039 364 aaKnown RBP12.45□□□□□ -0.42
NIP7-201ENST00000254940 RPS24P62847 133 aaKnown RBP12.45□□□□□ -0.42
NIP7-201ENST00000254940 CALCOCO2Q13137 446 aa12.45□□□□□ -0.42
NIP7-201ENST00000254940 DPYSL3Q14195 570 aa12.45□□□□□ -0.42
NIP7-201ENST00000254940 KRT81Q14533 505 aa12.45□□□□□ -0.42
NIP7-201ENST00000254940 HADHQ16836 314 aaKnown RBP12.45□□□□□ -0.42
NIP7-201ENST00000254940 CAPN12Q6ZSI9 719 aa12.45□□□□□ -0.42
NIP7-201ENST00000254940 TFAP2DQ7Z6R9 452 aa12.45□□□□□ -0.42
NIP7-201ENST00000254940 CHSY1Q86X52 802 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms