RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 TPBGLP0DKB5 382 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 TSHZ1Q6ZSZ6 1077 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 DEFB132Q7Z7B7 95 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 SHCBP1Q8NEM2 672 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 RMND5BQ96G75 393 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 SEPHS2Q99611 448 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 PCDH18Q9HCL0 1135 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF229Q9UJW7 825 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 LRFN2Q9ULH4 789 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 NFASCO94856 1347 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 PTPRJQ12913 1337 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 HEATR9A2RTY3 570 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF839A8K0R7 811 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 ERI2A8K979 691 aaKnown RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 H3BRB1 525 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 SLC25A27O95847 323 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 ATXN8OSP0DMR3 200 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 PSMA4P25789 261 aaKnown RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 TKTL1P51854 596 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 ATP1A4Q13733 1029 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 NEDD8Q15843 81 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 SLC44A4Q53GD3 710 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 OTOP3Q7RTS5 596 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 URGCPQ8TCY9 931 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 DCUN1D5Q9BTE7 237 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 TUT1Q9H6E5 874 aaKnown RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 S100A14Q9HCY8 104 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 NUDT5Q9UKK9 219 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 KIAA1217Q5T5P2 1943 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 DCAF8L1A6NGE4 600 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 MAP4P27816 1152 aaKnown RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 RIN3Q8TB24 985 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 KCTD4Q8WVF5 259 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 P2RY11Q96G91 374 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 NDNQ99608 321 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 EGFL8Q99944 293 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 OMDQ99983 421 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 ST6GALNAC4Q9H4F1 302 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 NSMCE4AQ9NXX6 385 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 TAS2R1Q9NYW7 299 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 RNF181Q9P0P0 153 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 MCM3APO60318 1980 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 CCL15-CCL14A0A0B4J2E2 113 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 E5RI56 91 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 GPR25O00155 361 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 AP3B1O00203 1094 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 NPM3O75607 178 aaKnown RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 ANXA9O76027 345 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 LTFP02788 710 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 CYP1A1P04798 512 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 TGFB3P10600 412 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 FASTKQ14296 549 aaKnown RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 CCL15Q16663 113 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 AGAP9Q5VTM2 703 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 SCARA3Q6AZY7 606 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 LINC00523Q86TU6 105 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 PCDH19Q8TAB3 1148 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 SEC14L1Q92503 715 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 NPAS2Q99743 824 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 EBF3Q9H4W6 596 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 GPAMQ9HCL2 828 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 CD274Q9NZQ7 290 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 PRG3Q9Y2Y8 225 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 AHCYL1O43865 530 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 TCEA3O75764 348 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 RECQL4O94761 1208 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 ADGRD1Q6QNK2 874 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 B3GNT6Q6ZMB0 384 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 ZBTB46Q86UZ6 589 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 XYLT1Q86Y38 959 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 HPS6Q86YV9 775 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 ACMSDQ8TDX5 336 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 HASPINQ8TF76 798 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 TRAPPC9Q96Q05 1148 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 CDHR5Q9HBB8 845 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 SYBUQ9NX95 663 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 MAP3K20Q9NYL2 800 aaKnown RBP4.7□□□□□ -1.66
VPS13C-201ENST00000249837 TRMT6Q9UJA5 497 aaKnown RBP4.7□□□□□ -1.66
VPS13C-201ENST00000249837 UBQLN1Q9UMX0 589 aaKnown RBP4.7□□□□□ -1.66
VPS13C-201ENST00000249837 TNFSF13BQ9Y275 285 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 PKP3Q9Y446 797 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 RGSL1A5PLK6 1076 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 EDIL3O43854 480 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 ALBP02768 609 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 IL1R2P27930 398 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 GABRB2P47870 512 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 FKBP1AP62942 108 aaKnown RBP4.7□□□□□ -1.66
VPS13C-201ENST00000249837 DCAF4L1Q3SXM0 396 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 ZIK1Q3SY52 487 aaPredicted RBP4.7□□□□□ -1.66
VPS13C-201ENST00000249837 RHBDF2Q6PJF5 856 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 CATSPERGQ6ZRH7 1159 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 CLEC4FQ8N1N0 589 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 CATSPERBQ9H7T0 1116 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 PCDHA11Q9Y5I1 949 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 CSH1P0DML2 217 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 CSH2P0DML3 217 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 VAV1P15498 845 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 ACVR2BQ13705 512 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 PMF1Q6P1K2 205 aa4.7□□□□□ -1.66
VPS13C-201ENST00000249837 PYROXD2Q8N2H3 581 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms