RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 HOXC6P09630 235 aa11.69□□□□□ -0.54
NIN-201ENST00000245441 CYP2A7P20853 494 aa11.69□□□□□ -0.54
NIN-201ENST00000245441 OR1E1P30953 314 aa11.69□□□□□ -0.54
NIN-201ENST00000245441 MAGEA10P43363 369 aaPredicted RBP11.69□□□□□ -0.54
NIN-201ENST00000245441 OAZ1P54368 228 aa11.69□□□□□ -0.54
NIN-201ENST00000245441 RNF145Q96MT1 663 aa11.69□□□□□ -0.54
NIN-201ENST00000245441 BTNL10A8MVZ5 291 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 ITGAVP06756 1048 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 HPGDP15428 266 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 MGAT1P26572 445 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 PRKCIP41743 596 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 NEDD8Q15843 81 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 CTXN3Q4LDR2 81 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 NAIF1Q69YI7 327 aaPredicted RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 KCNT2Q6UVM3 1135 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 CARNMT1Q8N4J0 409 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 SERPINB11Q96P15 392 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 MYH14Q7Z406 1995 aaKnown RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 H0YC42 278 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 IL1R1P14778 569 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 GRK4P32298 578 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 RPA3P35244 121 aaPredicted RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 TRIM63Q969Q1 353 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 ZCCHC2Q9C0B9 1178 aaKnown RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 GPATCH2LQ9NWQ4 482 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 SPATA31A5Q5VU36 1347 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 SPATA31A7Q8IWB4 1347 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 H3BRB1 525 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 SLITRK3O94933 977 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 MBL2P11226 248 aaPredicted RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 ADHFE1Q8IWW8 467 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 TUT1Q9H6E5 874 aaKnown RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 FANCEQ9HB96 536 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 RAB27AP51159 221 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 PRAMEF18Q5VWM3 479 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 NET1Q7Z628 596 aaPredicted RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 CHD2O14647 1828 aaKnown RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 TBC1D12O60347 775 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 UNC5CO95185 931 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 IL6P05231 212 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 DRG2P55039 364 aaKnown RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 EN1Q05925 392 aaPredicted RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 DGUOKQ16854 277 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 RINLQ6ZS11 566 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 STK40Q8N2I9 435 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 TBL1YQ9BQ87 522 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 ABHD2P08910 425 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 ETS1P14921 441 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 NOS3P29474 1203 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 ELAVL2Q12926 359 aaKnown RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 CAMK1DQ8IU85 385 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 SLC2A4P14672 509 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 HALP42357 657 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 NEK3P51956 506 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 IFRD1O00458 451 aaPredicted RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 ZNF7P17097 686 aaPredicted RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 MIPP30301 263 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 CDC73Q6P1J9 531 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 ARCQ7LC44 396 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 ARHGAP22Q7Z5H3 698 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 ITFG1Q8TB96 612 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 CDRT15Q96T59 188 aa11.68□□□□□ -0.54
NIN-201ENST00000245441 A1CFQ9NQ94 594 aaKnown RBP11.68□□□□□ -0.54
NIN-201ENST00000245441 RPL14P50914 215 aaKnown RBP11.67□□□□□ -0.54
NIN-201ENST00000245441 WDR36Q8NI36 951 aaKnown RBP11.67□□□□□ -0.54
NIN-201ENST00000245441 CKAP2Q8WWK9 683 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 APBA2Q99767 749 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 HMGB3O15347 200 aaKnown RBP11.67□□□□□ -0.54
NIN-201ENST00000245441 FAM20BO75063 409 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 CLTBP09497 229 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 ADRA1DP25100 572 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 ATP1A4Q13733 1029 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 TYW3Q6IPR3 259 aaKnown RBP11.67□□□□□ -0.54
NIN-201ENST00000245441 SAMD7Q7Z3H4 446 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 DDX18Q9NVP1 670 aaKnown RBP11.67□□□□□ -0.54
NIN-201ENST00000245441 PPP2R3BQ9Y5P8 575 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 TTLL13PA6NNM8 815 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 KPNA6O60684 536 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 EIF2B2P49770 351 aaKnown RBP11.67□□□□□ -0.54
NIN-201ENST00000245441 DCTN2Q13561 401 aaKnown RBP11.67□□□□□ -0.54
NIN-201ENST00000245441 C11orf88Q6PI97 169 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 ENKURQ8TC29 256 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 NAA20P61599 178 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 SLC6A3Q01959 620 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 OVOS1Q6IE37 1185 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 CCDC149Q6ZUS6 474 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 ZNF410Q86VK4 478 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 TMEM159Q96B96 161 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 LIMD1Q9UGP4 676 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 CNTNAP2Q9UHC6 1331 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 RECQL5O94762 991 aaPredicted RBP11.67□□□□□ -0.54
NIN-201ENST00000245441 CPSF4O95639 269 aaKnown RBP11.67□□□□□ -0.54
NIN-201ENST00000245441 C21orf59P57076 290 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 TBX4P57082 545 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 B3GNT6Q6ZMB0 384 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 SNX32Q86XE0 403 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 PALB2Q86YC2 1186 aa11.67□□□□□ -0.54
NIN-201ENST00000245441 BRSK2Q8IWQ3 736 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms