RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 PORCNQ9H237 461 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 RAD54BQ9Y620 910 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 COPG1Q9Y678 874 aaKnown RBP20.24■□□□□ 0.83
SOX4-201ENST00000244745 LTFP02788 710 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 CCNG1P51959 295 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 MARSP56192 900 aaKnown RBP20.24■□□□□ 0.83
SOX4-201ENST00000244745 HGSNATQ68CP4 663 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 MAGEC3Q8TD91 643 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 MKL1Q969V6 931 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 ABHD8Q96I13 439 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 CLPBQ9H078 707 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 MPP6Q9NZW5 540 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 CCDC154A6NI56 674 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 PEX1O43933 1283 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 MAPK1P28482 360 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 TRHDEQ9UKU6 1024 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 hCG_1818297A0A087WSY0 165 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 ITGADQ13349 1161 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 LACTB2Q53H82 288 aaPredicted RBP20.24■□□□□ 0.83
SOX4-201ENST00000244745 CWF19L1Q69YN2 538 aaKnown RBP20.24■□□□□ 0.83
SOX4-201ENST00000244745 ILDR2Q71H61 639 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 SLC41A1Q8IVJ1 513 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 PCDH20Q8N6Y1 951 aaKnown RBP20.24■□□□□ 0.83
SOX4-201ENST00000244745 REPS2Q8NFH8 660 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 MBOAT7Q96N66 472 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 SPATC1LQ9H0A9 340 aa20.24■□□□□ 0.83
SOX4-201ENST00000244745 A0A087WXM4 84 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 FSCN2O14926 492 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 BMT2Q1RMZ1 405 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 RAET1EQ8TD07 263 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 SHC3Q92529 594 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 PURBQ96QR8 312 aaKnown RBP20.23■□□□□ 0.83
SOX4-201ENST00000244745 GUCA1CO95843 209 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 SLURP2P0DP57 97 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 FAM98BQ52LJ0 330 aaKnown RBP20.23■□□□□ 0.83
SOX4-201ENST00000244745 MROH8Q9H579 483 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 WDR41Q9HAD4 459 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 PACSIN3Q9UKS6 424 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 ZMYND8Q9ULU4 1186 aaPredicted RBP20.23■□□□□ 0.83
SOX4-201ENST00000244745 NOL4O94818 638 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 HIST2H2ACQ16777 129 aaPredicted RBP20.23■□□□□ 0.83
SOX4-201ENST00000244745 HIST2H2AA3Q6FI13 130 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 FAM117BQ6P1L5 589 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 OR52K1Q8NGK4 314 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 RABGEF1Q9UJ41 708 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 ZNF862O60290 1169 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 LCA5LO95447 670 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 SKIV2L2P42285 1042 aaKnown RBP20.23■□□□□ 0.83
SOX4-201ENST00000244745 VPS33AQ96AX1 596 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 LRRC39Q96DD0 335 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 FAM120BQ96EK7 910 aaKnown RBP20.23■□□□□ 0.83
SOX4-201ENST00000244745 C6orf62Q9GZU0 229 aaPredicted RBP20.23■□□□□ 0.83
SOX4-201ENST00000244745 ASB7Q9H672 318 aa20.23■□□□□ 0.83
SOX4-201ENST00000244745 FAM20BO75063 409 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 YBX3P16989 372 aaKnown RBP eCLIP20.22■□□□□ 0.83
SOX4-201ENST00000244745 ZNF157P51786 506 aaPredicted RBP20.22■□□□□ 0.83
SOX4-201ENST00000244745 CNTN2Q02246 1040 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 DACT2Q5SW24 774 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 SLC9A9Q8IVB4 645 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 RERGLQ9H628 205 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 F8W810 466 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 CCNT2O60583 730 aaKnown RBP20.22■□□□□ 0.83
SOX4-201ENST00000244745 NBNO60934 754 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 ITGB6P18564 788 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 TNFSF9P41273 254 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 RPL7AP62424 266 aaKnown RBP20.22■□□□□ 0.83
SOX4-201ENST00000244745 SCARA3Q6AZY7 606 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 FAM83AQ86UY5 434 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 PHF13Q86YI8 300 aaPredicted RBP20.22■□□□□ 0.83
SOX4-201ENST00000244745 ZNF513Q8N8E2 541 aaPredicted RBP20.22■□□□□ 0.83
SOX4-201ENST00000244745 PIWIL2Q8TC59 973 aaKnown RBP20.22■□□□□ 0.83
SOX4-201ENST00000244745 OMA1Q96E52 524 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 MAGED4Q96JG8 741 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 PCDHB18PQ96TA0 734 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 REXO4Q9GZR2 422 aaKnown RBP20.22■□□□□ 0.83
SOX4-201ENST00000244745 HSD3B7Q9H2F3 369 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 A0A087X1B8 175 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 CCR1P32246 355 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 PARP6Q2NL67 630 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 EML3Q32P44 896 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 MARC1Q5VT66 337 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 LRRC38Q5VT99 294 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 FNDC5Q8NAU1 212 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 TMA7Q9Y2S6 64 aaKnown RBP20.22■□□□□ 0.83
SOX4-201ENST00000244745 DCDC2CA8MYV0 355 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 BST1Q10588 318 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 FBXO39Q8N4B4 442 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 RNF19AQ9NV58 838 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 RRN3Q9NYV6 651 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 SALL4Q9UJQ4 1053 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 ROBO3Q96MS0 1386 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 COX4I1P13073 169 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 NSMCE2Q96MF7 247 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 SELENONQ9NZV5 590 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 ATXN10Q9UBB4 475 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 SESN1Q9Y6P5 492 aa20.22■□□□□ 0.83
SOX4-201ENST00000244745 H3BRB1 525 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 TUBP50607 506 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 NOMO3P69849 1222 aa20.21■□□□□ 0.83
SOX4-201ENST00000244745 LPCAT1Q8NF37 534 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms