RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 AVENQ9NQS1 362 aaPredicted RBP13.63□□□□□ -0.23
NEK4-201ENST00000233027 KCNK4Q9NYG8 393 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 KLHL3Q9UH77 587 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 DSEQ9UL01 958 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 PCDHA11Q9Y5I1 949 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 PIPSLA2A3N6 862 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 CLK2P49760 499 aaKnown RBP13.63□□□□□ -0.23
NEK4-201ENST00000233027 ANXA11P50995 505 aaKnown RBP13.63□□□□□ -0.23
NEK4-201ENST00000233027 CASP7P55210 303 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 TBX4P57082 545 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 CSNK2BP67870 215 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 GRIK3Q13003 919 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 MAMLD1Q13495 774 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 PLEKHH3Q7Z736 793 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 OPTNQ96CV9 577 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 ERLEC1Q96DZ1 483 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 MTMR9Q96QG7 549 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 MMADHCQ9H3L0 296 aaPredicted RBP13.63□□□□□ -0.23
NEK4-201ENST00000233027 RPS6KB2Q9UBS0 482 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 ZNF112Q9UJU3 913 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 SNCAIPQ9Y6H5 919 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 APOC4-APOC2K7ER74 178 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 IFNA14P01570 189 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 APOC2P02655 101 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.63□□□□□ -0.23
NEK4-201ENST00000233027 RNF180Q86T96 592 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 FAM126BQ8IXS8 530 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 KCND1Q9NSA2 647 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 IL1R1P14778 569 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 YWHAZP63104 245 aaKnown RBP13.63□□□□□ -0.23
NEK4-201ENST00000233027 C1DQ13901 141 aaKnown RBP13.63□□□□□ -0.23
NEK4-201ENST00000233027 SPDYCQ5MJ68 293 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 MILR1Q7Z6M3 343 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 ITFG1Q8TB96 612 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 EPS8L1Q8TE68 723 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 DEPDC7Q96QD5 511 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 OSGEPL1Q9H4B0 414 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 WDR41Q9HAD4 459 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 TRPM5Q9NZQ8 1165 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 COPG2Q9UBF2 871 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 NUDT5Q9UKK9 219 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 KRT36O76013 467 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 EGFRP00533 1210 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 KRT20P35900 424 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 HK2P52789 917 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 BOP1Q14137 746 aaKnown RBP13.62□□□□□ -0.23
NEK4-201ENST00000233027 ZFP1Q6P2D0 407 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 HERC6Q8IVU3 1022 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 OR52K1Q8NGK4 314 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 TKTL2Q9H0I9 626 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 NRDE2Q9H7Z3 1164 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 DMAP1Q9NPF5 467 aaPredicted RBP13.62□□□□□ -0.23
NEK4-201ENST00000233027 TLR8Q9NR97 1041 aaKnown RBP13.62□□□□□ -0.23
NEK4-201ENST00000233027 RABGEF1Q9UJ41 708 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 SESN1Q9Y6P5 492 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 RAD51BO15315 384 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 ASNA1O43681 348 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 RAMP2O60895 175 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 ADRB2P07550 413 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 PTDSS1P48651 473 aaKnown RBP13.62□□□□□ -0.23
NEK4-201ENST00000233027 RPL14P50914 215 aaKnown RBP13.62□□□□□ -0.23
NEK4-201ENST00000233027 DMPKQ09013 629 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 ACAP1Q15027 740 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 EPHX4Q8IUS5 362 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 UXS1Q8NBZ7 420 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 METTL6Q8TCB7 284 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 RSPH1Q8WYR4 309 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 HGH1Q9BTY7 390 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 RNPEPL1Q9HAU8 725 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 PRDM4Q9UKN5 801 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 TMEM114B3SHH9 223 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 LIASO43766 372 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 ALDH1A2O94788 518 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 DNAJB2P25686 324 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 ADARP55265 1226 aaKnown RBP13.62□□□□□ -0.23
NEK4-201ENST00000233027 CCDC149Q6ZUS6 474 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 PHACTR4Q8IZ21 702 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 FAM9CQ8IZT9 166 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 OR56A4Q8NGH8 313 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 RORBQ92753 470 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 TMEM169Q96HH4 297 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 CHKBQ9Y259 395 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 ASTN1O14525 1302 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 TRDMT1O14717 391 aaKnown RBP13.62□□□□□ -0.23
NEK4-201ENST00000233027 VEGFAP15692 232 aaPredicted RBP13.62□□□□□ -0.23
NEK4-201ENST00000233027 TRIM71Q2Q1W2 868 aaKnown RBP13.62□□□□□ -0.23
NEK4-201ENST00000233027 USP39Q53GS9 565 aaKnown RBP13.62□□□□□ -0.23
NEK4-201ENST00000233027 PDZK1Q5T2W1 519 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 IL27RAQ6UWB1 636 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 KYAT3Q6YP21 454 aaKnown RBP13.62□□□□□ -0.23
NEK4-201ENST00000233027 C16orf59Q7L2K0 433 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 DHRSXQ8N5I4 330 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 GLT1D1Q96MS3 346 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 TBCBQ99426 244 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 EMILIN2Q9BXX0 1053 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 BTBD7Q9P203 1132 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 FZD1Q9UP38 647 aa13.62□□□□□ -0.23
NEK4-201ENST00000233027 FAM220BPB1ANY3 271 aa13.61□□□□□ -0.23
NEK4-201ENST00000233027 H3BRB1 525 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms