RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 NECTIN4Q96NY8 510 aa8.17□□□□□ -1.1
NANOG-201ENST00000229307 MLPHQ9BV36 600 aaPredicted RBP8.17□□□□□ -1.1
NANOG-201ENST00000229307 PACSIN1Q9BY11 444 aa8.17□□□□□ -1.1
NANOG-201ENST00000229307 UPF3AQ9H1J1 476 aaKnown RBP8.17□□□□□ -1.1
NANOG-201ENST00000229307 TRABDQ9H4I3 376 aa8.17□□□□□ -1.1
NANOG-201ENST00000229307 COG4Q9H9E3 785 aa8.17□□□□□ -1.1
NANOG-201ENST00000229307 TXLNGQ9NUQ3 528 aa8.17□□□□□ -1.1
NANOG-201ENST00000229307 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.17□□□□□ -1.1
NANOG-201ENST00000229307 ERVW-1Q9UQF0 538 aa8.17□□□□□ -1.1
NANOG-201ENST00000229307 ESYT3A0FGR9 886 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 LRRC72A6NJI9 287 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 CACNB4O00305 520 aaPredicted RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 AGTP01019 485 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 KDELR1P24390 212 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 NOMO3P69849 1222 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 MRPS25P82663 173 aaKnown RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 PARP6Q2NL67 630 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 TSNAXIP1Q2TAA8 658 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 SPDYAQ5MJ70 313 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 RFX8Q6ZV50 586 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 POLNQ7Z5Q5 900 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 PRPF39Q86UA1 669 aaKnown RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 MMGT1Q8N4V1 131 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 CELF5Q8N6W0 485 aaKnown RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 PHOSPHO2Q8TCD6 241 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 GRIN3AQ8TCU5 1115 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 GPR152Q8TDT2 470 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 TIFAQ96CG3 184 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 C16orf70Q9BSU1 422 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 TRIM10Q9UDY6 481 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 RBM47A0AV96 593 aaKnown RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 RNF103O00237 685 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 TRIM16O95361 564 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 ATP4AP20648 1035 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 CST5P28325 142 aaPredicted RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 NRIP1P48552 1158 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 SPIRE1Q08AE8 756 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 SMAD1Q15797 465 aaKnown RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 CCDC38Q502W7 563 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 CHST9Q7L1S5 443 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 SLC26A7Q8TE54 656 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 LZICQ8WZA0 190 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 TOX2Q96NM4 488 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 GANQ9H2C0 597 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 RASSF4Q9H2L5 321 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 WDR41Q9HAD4 459 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 VCX3AQ9NNX9 186 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 OSGEPQ9NPF4 335 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 SMARCAL1Q9NZC9 954 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 SELENONQ9NZV5 590 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 RCOR3Q9P2K3 495 aaPredicted RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 RNF112Q9ULX5 631 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 PCDHGC3Q9UN70 934 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 L1RE1Q9UN81 338 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 PTPRJQ12913 1337 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 INPPL1O15357 1258 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 ACSL4O60488 711 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 STMN1P16949 149 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 CAP1Q01518 475 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 USP4Q13107 963 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 PDGFRLQ15198 375 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 TRIP4Q15650 581 aaPredicted RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 ARHGAP17Q68EM7 881 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 PSTKQ8IV42 348 aaKnown RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 TMEM192Q8IY95 271 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 C12orf29Q8N999 325 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 VPS37AQ8NEZ2 397 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 BCAS4Q8TDM0 211 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 POF1BQ8WVV4 589 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 WDR24Q96S15 920 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 CDCA3Q99618 268 aaPredicted RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 LRRC1Q9BTT6 524 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 TRMT61BQ9BVS5 477 aaKnown RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 ISCUQ9H1K1 167 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 MAN1C1Q9NR34 630 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 YIPF1Q9Y548 306 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 ZNF185O15231 689 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 HNRNPA1P09651 372 aaKnown RBP eCLIP8.16□□□□□ -1.1
NANOG-201ENST00000229307 SLC2A4P14672 509 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 GPR1P46091 355 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 CDH4P55283 916 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 EFTUD2Q15029 972 aaKnown RBP eCLIP8.16□□□□□ -1.1
NANOG-201ENST00000229307 SPANXN3Q5MJ09 141 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 SCARA3Q6AZY7 606 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 TTC7BQ86TV6 843 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 NCLNQ969V3 563 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 Q9H521 79 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 PCDHB9Q9Y5E1 797 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 MYH3P11055 1940 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 DNAJC25-GNG10A0A024R161 153 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 O00370 1275 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 RBP1P09455 135 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 MAPK1P28482 360 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 SERPINH1P50454 418 aaKnown RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 ANXA11P50995 505 aaKnown RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 YBEYP58557 167 aaPredicted RBP8.16□□□□□ -1.1
NANOG-201ENST00000229307 KDSRQ06136 332 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 XRCC4Q13426 336 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 TP53BP2Q13625 1128 aa8.16□□□□□ -1.1
NANOG-201ENST00000229307 CCDC85BQ15834 202 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms