RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 WDR55Q9H6Y2 383 aaPredicted RBP18.95■□□□□ 0.62
CACTIN-201ENST00000221899 DMAP1Q9NPF5 467 aaPredicted RBP18.95■□□□□ 0.62
CACTIN-201ENST00000221899 NUDT2P50583 147 aa18.95■□□□□ 0.62
CACTIN-201ENST00000221899 SLC26A9Q7LBE3 791 aa18.95■□□□□ 0.62
CACTIN-201ENST00000221899 APOBEC3FQ8IUX4 373 aaKnown RBP18.95■□□□□ 0.62
CACTIN-201ENST00000221899 ICA1LQ8NDH6 482 aa18.95■□□□□ 0.62
CACTIN-201ENST00000221899 ADAM32Q8TC27 787 aa18.95■□□□□ 0.62
CACTIN-201ENST00000221899 CENPIQ92674 756 aaPredicted RBP18.95■□□□□ 0.62
CACTIN-201ENST00000221899 HES2Q9Y543 173 aa18.95■□□□□ 0.62
CACTIN-201ENST00000221899 PCDHB12Q9Y5F1 795 aa18.95■□□□□ 0.62
CACTIN-201ENST00000221899 ZNF487B1APH4 448 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 TSPAN1O60635 241 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 LTFP02788 710 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 GARSP41250 739 aaKnown RBP18.94■□□□□ 0.62
CACTIN-201ENST00000221899 SULT1E1P49888 294 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 FOLH1Q04609 750 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 FAM187BQ17R55 369 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 FSTL4Q6MZW2 842 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 EPGNQ6UW88 154 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 PID1Q7Z2X4 250 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 TDRD5Q8NAT2 981 aaKnown RBP18.94■□□□□ 0.62
CACTIN-201ENST00000221899 PRDM12Q9H4Q4 367 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 FAM96AQ9H5X1 160 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 ERAP1Q9NZ08 941 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 SSX2IPQ9Y2D8 614 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 CCDC78A2IDD5 438 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 SPATA31D3P0C874 917 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 SETSIPP0DME0 302 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 MYL4P12829 197 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 MTTPP55157 894 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 IFRD2Q12894 506 aaPredicted RBP18.94■□□□□ 0.62
CACTIN-201ENST00000221899 INSCQ1MX18 579 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 SMYD5Q6GMV2 418 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 SPATA31D4Q6ZUB0 917 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 KBTBD6Q86V97 674 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 ACVR1CQ8NER5 493 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 NFKBIZQ9BYH8 718 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 CDY2AQ9Y6F7 541 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 CDY1Q9Y6F8 540 aa18.94■□□□□ 0.62
CACTIN-201ENST00000221899 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.93■□□□□ 0.62
CACTIN-201ENST00000221899 GOLGA8TH3BQL2 631 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 CHRNGP07510 517 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 ZNF286BP0CG31 522 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 SAT1P21673 171 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 LMO2P25791 158 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 RPS6KA3P51812 740 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 FSCBQ5H9T9 825 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 DEFB106AQ8N104 65 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 TTC39CQ8N584 583 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 RNF148Q8N7C7 305 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 CPNE1Q99829 537 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 TXNRD2Q9NNW7 524 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 SNTG2Q9NY99 539 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.93■□□□□ 0.62
CACTIN-201ENST00000221899 DTNAQ9Y4J8 743 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 A0A096LPK6 155 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 ANKRD33BA6NCL7 494 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 G3V2L1 256 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 USP2O75604 605 aaPredicted RBP18.93■□□□□ 0.62
CACTIN-201ENST00000221899 AMHP03971 560 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 MPSTP25325 297 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 ALDH1A3P47895 512 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 APOL2Q9BQE5 337 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 FZD10Q9ULW2 581 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 CITO14578 2027 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 C15orf38-AP3S2A0A0A6YYH1 394 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 HACD1B0YJ81 288 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 TOMM70O94826 608 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 SLC26A2P50443 739 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 CHN2P52757 468 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 BST2Q10589 180 aaKnown RBP18.93■□□□□ 0.62
CACTIN-201ENST00000221899 Q3C1V9 767 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 CCDC153Q494R4 210 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 ANKRD20A4Q4UJ75 823 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 HSP90AA5PQ58FG0 334 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 DCAF6Q58WW2 860 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 ZNF618Q5T7W0 954 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 GRTP1Q5TC63 336 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 ARPINQ7Z6K5 226 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 SNX32Q86XE0 403 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 ZDHHC17Q8IUH5 632 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 RNF139Q8WU17 664 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 NMD3Q96D46 503 aaKnown RBP18.93■□□□□ 0.62
CACTIN-201ENST00000221899 CAMKK2Q96RR4 588 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 RBBP8Q99708 897 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 TCF7L2Q9NQB0 619 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 CLIC5Q9NZA1 410 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 PCDHGB4Q9UN71 923 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 TBC1D30Q9Y2I9 924 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 PCDHGB5Q9Y5G0 923 aa18.93■□□□□ 0.62
CACTIN-201ENST00000221899 ZNF638Q14966 1978 aaKnown RBP18.92■□□□□ 0.62
CACTIN-201ENST00000221899 KLHL33A6NCF5 533 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 CFLARO15519 480 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 EPHA3P29320 983 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 SERPINB8P50452 374 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 SNX16P57768 344 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 MRPS22P82650 360 aaKnown RBP18.92■□□□□ 0.62
CACTIN-201ENST00000221899 TMEM62Q0P6H9 643 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 PPP2R5DQ14738 602 aa18.92■□□□□ 0.62
CACTIN-201ENST00000221899 TLR1Q15399 786 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms