RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 ACKR2O00590 384 aa12.4□□□□□ -0.43
TSPAN9-201ENST00000011898 MAP3K13O43283 966 aa12.4□□□□□ -0.43
TSPAN9-201ENST00000011898 LZTS3O60299 673 aaPredicted RBP12.4□□□□□ -0.43
TSPAN9-201ENST00000011898 SNX2O60749 519 aa12.4□□□□□ -0.43
TSPAN9-201ENST00000011898 LYPLA2O95372 231 aa12.4□□□□□ -0.43
TSPAN9-201ENST00000011898 KDELR1P24390 212 aa12.4□□□□□ -0.43
TSPAN9-201ENST00000011898 KIZQ2M2Z5 673 aa12.4□□□□□ -0.43
TSPAN9-201ENST00000011898 LPCAT4Q643R3 524 aa12.4□□□□□ -0.43
TSPAN9-201ENST00000011898 AP4E1Q9UPM8 1137 aa12.4□□□□□ -0.43
TSPAN9-201ENST00000011898 A0A0G2JLL6 359 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 NOTOA8MTQ0 251 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 RAD51BO15315 384 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 TBC1D4O60343 1298 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 RHOBTB1O94844 696 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 CYP2C9P11712 490 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 NCAM1P13591 858 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 TGM2P21980 687 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 FDFT1P37268 417 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 DPYSL3Q14195 570 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 LDLRAD1Q5T700 205 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 LRRC38Q5VT99 294 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 TMEM53Q6P2H8 277 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 PRRT2Q7Z6L0 340 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 LENG9Q96B70 501 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 MFSD14AQ96MC6 490 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 PARK7Q99497 189 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 ZFYVE28Q9HCC9 887 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 DRG1Q9Y295 367 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 SIPA1L1O43166 1804 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 SPTLC1O15269 473 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 ALOX12P18054 663 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 TFE3P19532 575 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 ALDH1A3P47895 512 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 RPL10AP62906 217 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 CDC42EP1Q00587 391 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 DGKZQ13574 1117 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 KRR1Q13601 381 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 MAPRE2Q15555 327 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 SCUBE3Q8IX30 993 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 MBOAT7Q96N66 472 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 CCDC28BQ9BUN5 200 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 RABL2AQ9UBK7 228 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 KLHL20Q9Y2M5 609 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 STARD13Q9Y3M8 1113 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 ZBTB48P10074 688 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 RUNX1T1Q06455 604 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 CACNB2Q08289 660 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 SPIRE1Q08AE8 756 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 GPR107Q5VW38 600 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 PHF13Q86YI8 300 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 MTERF3Q96E29 417 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 SGF29Q96ES7 293 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 IFT43Q96FT9 208 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 C1orf50Q9BV19 199 aa12.39□□□□□ -0.43
TSPAN9-201ENST00000011898 CLOCKO15516 846 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 CCNE2O96020 404 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 UQCRBP14927 111 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 RPL22P35268 128 aaKnown RBP12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 SLC25A3Q00325 362 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 DENND1BQ6P3S1 775 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 NOTUMQ6P988 496 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 PDCD6IPQ8WUM4 868 aaKnown RBP12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 SPATC1LQ9H0A9 340 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 ABCB10Q9NRK6 738 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 DDIT4Q9NX09 232 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 GIN1Q9NXP7 522 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 KCNH4Q9UQ05 1017 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 TMED5Q9Y3A6 229 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 DOCK1Q14185 1865 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 MYO9BQ13459 2157 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 MANSC4A6NHS7 340 aaPredicted RBP12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 FOXO6A8MYZ6 492 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 BANF1O75531 89 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 INSRRP14616 1297 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 TAF5Q15542 800 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 ARMC4Q5T2S8 1044 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 MFSD5Q6N075 450 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 PRR23CQ6ZRP0 262 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 ECHDC2Q86YB7 292 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 ALLCQ8N6M5 410 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 IPMKQ8NFU5 416 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 LRRC39Q96DD0 335 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 APOPT1Q96IL0 206 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 TUBGCP5Q96RT8 1024 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 APOL2Q9BQE5 337 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 ILKAPQ9H0C8 392 aaPredicted RBP12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 MARCH7Q9H992 704 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 RPRD1BQ9NQG5 326 aaKnown RBP12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 PIH1D1Q9NWS0 290 aaKnown RBP12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 DCDC2Q9UHG0 476 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 UBQLN1Q9UMX0 589 aaKnown RBP12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 RPL26L1Q9UNX3 145 aaKnown RBP12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 SIGLEC16A6NMB1 481 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 CENPXA8MT69 81 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 BOLA2-SMG1P6H3BVE0 249 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 ZBTB11O95625 1053 aaPredicted RBP12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 CYP2F1P24903 491 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 RBL1P28749 1068 aa12.38□□□□□ -0.43
TSPAN9-201ENST00000011898 TAF6P49848 677 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms