RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 RCOR3Q9P2K3 495 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 PLA2G4CQ9UP65 541 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 CCDC195A0A1B0GUA6 201 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 PSMA1P25786 263 aaKnown RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 VPS26BQ4G0F5 336 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 SHQ1Q6PI26 577 aaKnown RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 OR6Y1Q8NGX8 325 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 OMA1Q96E52 524 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 SCUBE2Q9NQ36 999 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 DBR1Q9UK59 544 aaKnown RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 ZNF510Q9Y2H8 683 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 LOC102724159A0A0B4J2E5 919 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 A0A1W2PRG6 482 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 H3BUI4 141 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 MAGEB3O15480 346 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 SERPINA1P01009 418 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 TSPAN19P0C672 248 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 PGAM1P18669 254 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 STARP49675 285 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 CUL2Q13617 745 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 PWP2Q15269 919 aaKnown RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 RETSATQ6NUM9 610 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 RNF135Q8IUD6 432 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 C10orf107Q8IVU9 208 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 TMEM192Q8IY95 271 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 SFRP1Q8N474 314 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 UHMK1Q8TAS1 419 aaKnown RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 RNF145Q96MT1 663 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 SERPINB11Q96P15 392 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 PCIF1Q9H4Z3 704 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 ENTPD7Q9NQZ7 604 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 PHTF1Q9UMS5 762 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 TRIM49BA6NDI0 452 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 TRIM49D1C9J1S8 452 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 COILP38432 576 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 RPL5P46777 297 aaKnown RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 EIF2B2P49770 351 aaKnown RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 TMEM63BQ5T3F8 832 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 RNF180Q86T96 592 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 SLC40A1Q9NP59 571 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 DCP1AQ9NPI6 582 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 VPS45Q9NRW7 570 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 STX16O14662 325 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 ALADP13716 330 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 ASMTP46597 345 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 PNLIPRP1P54315 467 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 TRAF2Q12933 501 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 RBM43Q6ZSC3 357 aaKnown RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 NYAP1Q6ZVC0 841 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 TMC8Q8IU68 726 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 TMC2Q8TDI7 906 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 OSBP2Q969R2 916 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 TBX20Q9UMR3 447 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 L1RE1Q9UN81 338 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 LRRC14BA6NHZ5 514 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 BTNL10A8MVZ5 291 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 SMNDC1O75940 238 aaKnown RBP eCLIP6.19□□□□□ -1.421e-10■■□□□ 11.5
VPS13D-201ENST00000011700 CASP5P51878 434 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 PDX1P52945 283 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 SLC16A1P53985 500 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 PRKCEQ02156 737 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 LRRC38Q5VT99 294 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 RSBN1Q5VWQ0 802 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 NIPA1Q7RTP0 329 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 CLHC1Q8NHS4 586 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 CKAP2Q8WWK9 683 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 BBS4Q96RK4 519 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 COLEC11Q9BWP8 271 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 HPS4Q9NQG7 708 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 TLR8Q9NR97 1041 aaKnown RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 GABBR1Q9UBS5 961 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 HMGCRP04035 888 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 SOAT1P35610 550 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 C6orf52Q5T4I8 152 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 NT5DC1Q5TFE4 455 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 SCARA5Q6ZMJ2 495 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 ZNF410Q86VK4 478 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 SKAP1Q86WV1 359 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 SPICE1Q8N0Z3 855 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 PADI4Q9UM07 663 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 CD163L1Q9NR16 1453 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 UBR2Q8IWV8 1755 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 LRIG2O94898 1065 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 PRKCBP05771 671 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 CCT3P49368 545 aaKnown RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 NEK3P51956 506 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 ADAMTSL2Q86TH1 951 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 MB21D2Q8IYB1 491 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 PABPC5Q96DU9 382 aaKnown RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 HOPXQ9BPY8 73 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 APOL2Q9BQE5 337 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 RHOBTB2Q9BYZ6 727 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 KCNH7Q9NS40 1196 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 NUDT5Q9UKK9 219 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 ZNF214Q9UL59 606 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 SAMD4AQ9UPU9 718 aaKnown RBP6.19□□□□□ -1.42
VPS13D-201ENST00000011700 PCDHB7Q9Y5E2 793 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 AK5Q9Y6K8 562 aa6.19□□□□□ -1.42
VPS13D-201ENST00000011700 DISP2A7MBM2 1401 aa6.18□□□□□ -1.42
VPS13D-201ENST00000011700 ATG7O95352 703 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms