RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Col18a1P39061 1774 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tjp1P39447 1745 aaKnown RBP15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ank1Q02357 1862 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Pcdh7A0A0A6YY83 1255 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Mmp3P28862 477 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Prdx5P99029 210 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gm29609Q3UU56 907 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Mfhas1Q3V1N1 1048 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tmprss11eQ5S248 423 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gtf3c2Q8BL74 907 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Prpf18Q8BM39 342 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Stx5Q8K1E0 355 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Dnm1lQ8K1M6 742 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Erap1Q9EQH2 930 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Jph2Q9ET78 696 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Maged1Q9QYH6 775 aaKnown RBP15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 NumbQ9QZS3 653 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Wnt8bQ9WUD6 350 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Cdc42ep5Q9Z0X0 150 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Mbd1Q9Z2E2 636 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 A0A1Y7VP24 259 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Zfp651E9PZ11 729 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 TubP50586 505 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Il6stQ00560 917 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Krt73Q6NXH9 539 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 CapslQ6P8Y1 208 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Rps6ka6Q7TPS0 764 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Lrrc24Q8BHA1 521 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Dyrk4Q8BI55 632 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Taf5Q8C092 801 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Mlc1Q8VHK5 382 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Trps1Q925H1 1281 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Nipsnap3bQ9CQE1 247 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Q9D1F3 157 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Cyp4f14Q9EP75 524 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 PrccQ9EQC8 491 aaKnown RBP15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Dcun1d1Q9QZ73 259 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Dctn3Q9Z0Y1 186 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Sbno2Q7TNB8 1349 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Iqca1lA6H690 825 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 A530032D15RikE9Q422 215 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Serpind1P49182 478 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Itga4Q00651 1039 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 4930430A15RikQ05AC5 485 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Kcnk9Q3LS21 402 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Zdhhc19Q810M5 347 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ppm1nQ8BGL1 404 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Nup93Q8BJ71 819 aaKnown RBP15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Sbk1Q8QZX0 417 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 CinpQ9D0V8 212 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Pgam1Q9DBJ1 254 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Galnt4O08832 578 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Rtn2O70622 471 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Hsd17b7O88736 334 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Igsf9Q05BQ1 1179 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Syce1lQ5D525 247 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 LzicQ8K3C3 190 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Nxnl2Q9D531 156 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Sun1Q9D666 913 aaKnown RBP15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Vwa7Q9JHA8 891 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Cntnap4Q99P47 1310 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Pcna-ps2A0A140T8V5 261 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 ZfrO88532 1074 aaKnown RBP15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Serpina3kP07759 418 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 PcnaP17918 261 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tbc1d10aP58802 500 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Smyd5Q3TYX3 416 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Krr1Q8BGA5 380 aaKnown RBP15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 4921511C20RikQ8BVT7 469 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Unc93b1Q8VCW4 598 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Cyp2b13A6H6J2 491 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Rxfp1Q6R6I7 758 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Irak4Q8R4K2 459 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Smap1Q91VZ6 440 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tlr6Q9EPW9 795 aa15.86■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gm10639E9Q6L7 222 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gsta2P10648 222 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Nos2P29477 1144 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Vps51Q3UVL4 782 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 E330034G19RikQ3UWX6 351 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Znf583Q3V080 568 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 March4Q80TE3 409 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Iqsec1Q8R0S2 961 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Sgsm3Q8VCZ6 750 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 GldcQ91W43 1025 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Rfc5Q9D0F6 339 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tubgcp4Q9D4F8 667 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Prl2a1Q9JHK0 228 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Aldh1a3Q9JHW9 512 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tmem45a2B7ZWJ5 289 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gm281D3Z1Y0 860 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Akt1P31750 480 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Lhx5P61375 402 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Slc13a5Q67BT3 572 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 BegainQ68EF6 600 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Fam167aQ6P1G6 215 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Otub1Q7TQI3 271 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Sel1l3Q80TS8 1137 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Q8BP99 230 aa15.85■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Zfp263Q8CF60 680 aa15.85■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms