RNA–Protein interactions for RNA: ENSMUST00000061209.6

Ccdc71-201, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-201ENSMUST00000061209 RnaselQ05921 735 aa13.39□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Fbxo39Q5NBU5 443 aa13.39□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Aldh1a2Q62148 518 aa13.39□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Lysmd1Q9D0E3 226 aa13.39□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Rfc2Q9WUK4 349 aaKnown RBP13.39□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Cldn2O88552 230 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Rrp36Q3UFY0 244 aaKnown RBP13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Agap2Q3UHD9 1186 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Pik3r5Q5SW28 871 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Arnt2Q61324 712 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Rbl2Q64700 1135 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Dpy19l3Q71B07 716 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 TfQ921I1 697 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Ppp1r12aQ9DBR7 1029 aaKnown RBP13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Dpysl5Q9EQF6 564 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Rad9aQ9Z0F6 389 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Xbp1O35426 267 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Coro1aO89053 461 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Gpr3P35413 330 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Folr1P35846 255 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Rps24P62849 133 aaKnown RBP13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Foxred2Q3USW5 665 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Grm5Q3UVX5 1203 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Zbtb41Q811F1 908 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Slc38a9Q8BGD6 560 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Ticam2Q8BJQ4 232 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Smad3Q8BUN5 425 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Ccdc134Q8C7V8 229 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Trem2Q99NH8 227 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 PrccQ9EQC8 491 aaKnown RBP13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 QkiQ9QYS9 341 aaKnown RBP13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Col4a6B1AVK5 1691 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Umodl1Q5DID3 1319 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Zfp626A0A0U1RQ84 676 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Fam209A2APA5 170 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Hsd17b7O88736 334 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 CidecP56198 239 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Znf112Q0VAW7 879 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Arhgap30Q640N3 1101 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Wdr44Q6NVE8 915 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Abcg2Q7TMS5 657 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Trnau1apQ80VC6 287 aaKnown RBP13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 AjubaQ91XC0 547 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Prl5a1Q9JII2 230 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 D7h11orf16Q9JJR6 402 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Znf106O88466 1888 aa13.38□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Ccdc24E9PUW8 296 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Exoc7O35250 697 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Ncf2O70145 525 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 LdhcP00342 332 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Myl4P09541 193 aaKnown RBP13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Kdm7aQ3UWM4 940 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Srbd1Q497V5 1015 aaKnown RBP13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Birc2Q62210 612 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Sdad1Q80UZ2 687 aaKnown RBP13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Vipas39Q8BGQ1 491 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Tusc3Q8BTV1 347 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Stx16Q8BVI5 326 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Fam173bQ9D1Z3 247 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Slc22a17Q9D9E0 401 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Ccdc170D3YXL0 722 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Pold2O35654 469 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Prkag1O54950 330 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Plk2P53351 682 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Kcnn2P58390 839 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Olfm3P63056 478 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Atp8b1Q148W0 1251 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Zyg11bQ3UFS0 744 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Foxd4Q60688 444 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Trerf1Q8BXJ2 1205 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Pak5Q8C015 719 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Uhrf1Q8VDF2 782 aaKnown RBP13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Dlg2Q91XM9 852 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 MceeQ9D1I5 178 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Cpxm2Q9D2L5 764 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 4930449I24RikQ9D5E3 319 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Mpp6Q9JLB0 553 aa13.37□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Fam171a1A2ATK9 892 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Olfr414E9Q5P8 317 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Prf1P10820 554 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Lhx3P50481 400 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Rnf40Q3U319 1001 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Lsmem1Q3UQS2 128 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 PnocQ64387 187 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Dnajb13Q80Y75 316 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Cdkn3Q810P3 211 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Xylt1Q811B1 953 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Ppp1r15bQ8BFW3 697 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Ccdc159Q8C963 411 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Pde10aQ8CA95 790 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Nol6Q8R5K4 1152 aaKnown RBP13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Alg14Q9D081 217 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Oser1Q9D722 291 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Ccdc103Q9D9P2 237 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 MkksQ9JI70 570 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 ApipQ9WVQ5 241 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Slfn2Q9Z0I6 378 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Rp1l1Q8CGM2 1859 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 PorP37040 678 aa13.36□□□□□ -0.27
Ccdc71-201ENSMUST00000061209 Ppp3ccP48455 513 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms