RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Baiap2Q8BKX1 535 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Nipal1Q8BMW7 416 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Senp7Q8BUH8 1037 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Fndc5Q8K4Z2 209 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 IrgqQ8VIM9 583 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Sgf29Q9DA08 293 aaKnown RBP16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Lpcat1Q3TFD2 534 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Fam20cQ5MJS3 579 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Brsk2Q69Z98 735 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Uchl4P58321 233 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 StilQ60988 1262 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ahcyl1Q80SW1 530 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Noc4lQ8BHY2 516 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Spdye4bQ8CDE8 236 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Camta2Q80Y50 1208 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Fbxl13Q8CDU4 790 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pdpk1Q9Z2A0 559 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 AvilO88398 819 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Mbtd1Q6P5G3 631 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tsen15Q8R3W5 168 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Nphs2Q91X05 385 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Vps28Q9D1C8 221 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ddit4Q9D3F7 229 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Iqsec2Q5DU25 1478 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 2610021A01RikE9Q0Q3 834 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Q810S2 196 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Guf1Q8C3X4 651 aaKnown RBP16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tspan8Q8R3G9 235 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tbrg4Q91YM4 630 aaKnown RBP16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Rev1Q920Q2 1249 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Mpp2Q9WV34 552 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Olfr220E9Q050 325 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Efr3bQ6ZQ18 817 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Znf473Q8BI67 892 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Asap1Q9QWY8 1147 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Fam129aQ3UW53 926 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Zfp90Q61967 636 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Mcfd2Q8K5B2 145 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Eif2b2Q99LD9 351 aa16.89■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 PtproE9Q612 1226 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Galnt4O08832 578 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Bnc1O35914 961 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Cyp2d10P24456 504 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ccng1P51945 294 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Kcnd1Q03719 651 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Smarcd1Q61466 515 aaKnown RBP16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Otud6aQ6IE21 290 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gfm2Q8R2Q4 779 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Olfr1122Q8VGT9 326 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ferd3lQ923Z4 168 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Znf541Q0GGX2 1363 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Frmd7A2AD83 703 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 KdsrQ6GV12 332 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Cfap206Q6PE87 622 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Klhl36Q8R124 613 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Duoxa2Q9D311 320 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 MtrA6H5Y3 1253 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Rab2aP53994 212 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Irx2P81066 474 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Nudcd1Q6PIP5 582 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Erp27Q9D8U3 272 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 DmgdhQ9DBT9 869 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Fbxl16A2RT62 479 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Mtnr1aQ61184 353 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tmem260Q8BMD6 703 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tex22Q9D9U4 189 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Kifc5bE9PUA5 672 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Wrap53Q8VC51 532 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Sh3glb1Q9JK48 365 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Slc6a16A0A1L1SR47 742 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Armt1A6H630 439 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 P3h1Q3V1T4 739 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tlr12Q6QNU9 906 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Asnsd1Q8BFS9 627 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Slitrk6Q8C110 840 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pcdhac1Q91Y10 964 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Clvs1Q9D4C9 354 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Itgb6Q9Z0T9 787 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Prrg1A2BFE8 218 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Xirp1O70373 1129 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pcbp1P60335 356 aaKnown RBP16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Eif2ak2Q03963 515 aaKnown RBP16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 CltbQ6IRU5 229 aaKnown RBP16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ifnl3Q8CGK6 193 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 MyocdQ8VIM5 935 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Fam227bQ9D518 532 aa16.88■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 4930579F01RikE9Q3L6 325 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Olfr611K7N609 323 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Olfr612L7N462 323 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 FgrP14234 517 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Ces1cP23953 554 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Hdgfl2Q3UMU9 669 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Esrp1Q3US41 680 aaKnown RBP16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Thop1Q8C1A5 687 aaKnown RBP16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Tmc7Q8C428 726 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 BroxQ8K2Q7 411 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Olfr330Q8VGD9 315 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 B3galt4Q9Z0F0 371 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Pgbd1E9Q492 415 aa16.87■□□□□ 0.29
Ccdc88a-201ENSMUST00000040182 Gria1P23818 907 aa16.87■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms