RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Gprc5dQ9JIL6 344 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Mia3Q8BI84 1930 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Gm6133B2RY53 190 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Kbtbd2G3X9X1 623 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 StrnO55106 780 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 PdgfrbP05622 1098 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 TnfP06804 235 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Cyp2f2P33267 491 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Cln3Q61124 438 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Krt32Q62168 407 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 MregQ6NVG5 214 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Olfr792Q7TRH9 311 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Smndc1Q8BGT7 238 aaKnown RBP11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Fzd10Q8BKG4 582 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Tmem154Q8C4Q9 181 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Mtss1Q8R1S4 759 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Trim54Q9ERP3 366 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Tnfrsf10bQ9QZM4 381 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Apobec2Q9WV35 224 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Bscl2Q9Z2E9 383 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Fndc3c1Q6DFV6 1356 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 AlplP09242 524 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Vps4bP46467 444 aaKnown RBP11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 B3gat3P58158 335 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Abce1P61222 599 aaKnown RBP11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Avpr1aQ62463 423 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 GnasQ6R0H7 1133 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Smpd4Q6ZPR5 823 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Zbtb5Q7TQG0 670 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Nacc1Q7TSZ8 514 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Prpf38bQ80SY5 542 aaKnown RBP11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Suds3Q8BR65 328 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Plbd1Q8VCI0 550 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Slc25a3Q8VEM8 357 aaKnown RBP11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Pcdha1Q91Y21 948 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Syap1Q9D5V6 365 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 S1pr4Q9Z0L1 386 aa11.72□□□□□ -0.53
Herc4-201ENSMUST00000020258 Wdr49A0A0N4SUK7 710 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Osbpl8B9EJ86 889 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Akap5D3YVF0 745 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Vmn2r59E9PUT5 865 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Grip2G3XA20 1042 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Sh3pxd2aO89032 1124 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 TktP40142 623 aaKnown RBP11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Aqp4P55088 323 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Sdr16c6Q05A13 316 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Kcnc2Q14B80 642 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Akr1clQ3UXL1 322 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 PhgdhQ61753 533 aaKnown RBP11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Abhd10Q6PE15 297 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Bnip1Q6QD59 228 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Mtrf1lQ8BJU9 373 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Tmco6Q8BQX5 494 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Fbxl5Q8C2S5 690 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Gsto2Q8K2Q2 248 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 ItpkaQ8R071 459 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Gm36028A0A0U1RPM1 299 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Kcng2F7A6P6 480 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Syngr1O55100 234 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Mmp3P28862 477 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Asprv1Q09PK2 339 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Ptchd3Q0EEE2 906 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Akap14Q3V0I7 536 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 AcdQ5EE38 416 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Cntn2Q61330 1040 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Chsy1Q6ZQ11 800 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 WtipQ7TQJ8 398 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 ClmnQ8C5W0 1052 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 CtsqQ91ZF4 343 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Rgs10Q9CQE5 181 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Slc12a4Q9JIS8 1085 aa11.71□□□□□ -0.53
Herc4-201ENSMUST00000020258 Ccdc120A2AEV7 629 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Dhtkd1A2ATU0 921 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Vmn2r103E9PWW0 856 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Gm8257E9Q8R3 264 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 PrkcdP28867 674 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 SiaeP70665 541 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 OsbpQ3B7Z2 805 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Arl14Q3SXC5 192 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Elf3Q3UPW2 391 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 XpaQ64267 272 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Sel1l3Q80TS8 1137 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Pnma8aQ80VM8 430 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Cdkn2aipQ8BI72 563 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Atpaf2Q91YY4 289 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Decr1Q9CQ62 335 aaKnown RBP11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Them5Q9CQJ0 248 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Acot13Q9CQR4 140 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Zbtb12Q9Z150 459 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Atrnl1Q6A051 1378 aa11.71□□□□□ -0.54
Herc4-201ENSMUST00000020258 Gm10720D3Z1I5 223 aa11.7□□□□□ -0.54
Herc4-201ENSMUST00000020258 F6Y6L6 278 aa11.7□□□□□ -0.54
Herc4-201ENSMUST00000020258 Gm10721J3QPJ9 223 aa11.7□□□□□ -0.54
Herc4-201ENSMUST00000020258 Ptpn20O55082 426 aa11.7□□□□□ -0.54
Herc4-201ENSMUST00000020258 Ckmt1P30275 418 aaKnown RBP11.7□□□□□ -0.54
Herc4-201ENSMUST00000020258 Rab17P35292 214 aa11.7□□□□□ -0.54
Herc4-201ENSMUST00000020258 Ptger1P35375 405 aa11.7□□□□□ -0.54
Herc4-201ENSMUST00000020258 Sult1e1P49891 295 aa11.7□□□□□ -0.54
Herc4-201ENSMUST00000020258 Matn1P51942 500 aaKnown RBP11.7□□□□□ -0.54
Herc4-201ENSMUST00000020258 Ano7Q14AT5 859 aa11.7□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms