RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CEP41Q9BYV8 373 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 TLR9Q9NR96 1032 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 TRPM5Q9NZQ8 1165 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 DNMT3LQ9UJW3 386 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 PLAAQ9Y263 795 aa18.1■□□□□ 0.49
PHGDH-232ENST00000641947 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-232ENST00000641947 GOLGA6L7A0A1B0GV03 622 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 ADH1AP07327 375 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 CA3P07451 260 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 ATP5C1P36542 298 aaKnown RBP18.09■□□□□ 0.49
PHGDH-232ENST00000641947 TUBP50607 506 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 GALNT2Q10471 571 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 AP1B1Q10567 949 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 AUHQ13825 339 aaKnown RBP18.09■□□□□ 0.49
PHGDH-232ENST00000641947 PDK1Q15118 436 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 SYCP2LQ5T4T6 812 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 CFAP58Q5T655 872 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 RAP1GAP2Q684P5 730 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 HEATR6Q6AI08 1181 aaKnown RBP18.09■□□□□ 0.49
PHGDH-232ENST00000641947 ATP6V0D2Q8N8Y2 350 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 IGSF8Q969P0 613 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 P2RY11Q96G91 374 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 SLC22A12Q96S37 553 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 LRRC3Q9BY71 257 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 CDC42EP4Q9H3Q1 356 aaKnown RBP18.09■□□□□ 0.49
PHGDH-232ENST00000641947 OGFRQ9NZT2 677 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 SHOC2Q9UQ13 582 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 TNRC18O15417 2968 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-232ENST00000641947 C5orf60A6NFR6 353 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 GOLGA8MH3BSY2 632 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 GCATO75600 419 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 CNTN5O94779 1100 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 METTL18O95568 372 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 C8AP07357 584 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 HTR7P34969 479 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 BASP1P80723 227 aaKnown RBP18.09■□□□□ 0.49
PHGDH-232ENST00000641947 WASHC5Q12768 1159 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 KCNJ11Q14654 390 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 TAF12Q16514 161 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 ALS2CLQ60I27 953 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 KLHDC10Q6PID8 442 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 ARHGAP36Q6ZRI8 547 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 BZW1Q7L1Q6 419 aaKnown RBP18.09■□□□□ 0.49
PHGDH-232ENST00000641947 NLRP14Q86W24 1093 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 TMC8Q8IU68 726 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 PPIL6Q8IXY8 311 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 HS6ST3Q8IZP7 471 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 KREMEN2Q8NCW0 462 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 PAK5Q9P286 719 aa18.09■□□□□ 0.49
PHGDH-232ENST00000641947 HBS1LQ9Y450 684 aaKnown RBP18.09■□□□□ 0.49
PHGDH-232ENST00000641947 PPP1R12AO14974 1030 aaPredicted RBP18.08■□□□□ 0.48
PHGDH-232ENST00000641947 FGF10O15520 208 aaPredicted RBP18.08■□□□□ 0.48
PHGDH-232ENST00000641947 BANF1O75531 89 aa18.08■□□□□ 0.48
PHGDH-232ENST00000641947 CLCN4P51793 760 aa18.08■□□□□ 0.48
PHGDH-232ENST00000641947 PPIDQ08752 370 aaKnown RBP18.08■□□□□ 0.48
PHGDH-232ENST00000641947 ALFQ53S48 1182 aa18.08■□□□□ 0.48
PHGDH-232ENST00000641947 FBXL22Q6P050 247 aa18.08■□□□□ 0.48
PHGDH-232ENST00000641947 CCNYQ8ND76 341 aa18.08■□□□□ 0.48
PHGDH-232ENST00000641947 SLC22A17Q8WUG5 538 aa18.08■□□□□ 0.48
PHGDH-232ENST00000641947 CDK5RAP1Q96SZ6 601 aaKnown RBP18.08■□□□□ 0.48
PHGDH-232ENST00000641947 SH3GL2Q99962 352 aa18.08■□□□□ 0.48
PHGDH-232ENST00000641947 PABPC3Q9H361 631 aaKnown RBP18.08■□□□□ 0.48
PHGDH-232ENST00000641947 GKN1Q9NS71 199 aa18.08■□□□□ 0.48
PHGDH-232ENST00000641947 YBX2Q9Y2T7 364 aaKnown RBP18.08■□□□□ 0.48
PHGDH-232ENST00000641947 RAD54BQ9Y620 910 aa18.08■□□□□ 0.48
PHGDH-232ENST00000641947 IGLV3-10A0A075B6K4 115 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 RNF103O00237 685 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 KLKB1P03952 638 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 SHBGP04278 402 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 SLC6A4P31645 630 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 SERPINB6P35237 376 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 GARSP41250 739 aaKnown RBP18.07■□□□□ 0.48
PHGDH-232ENST00000641947 SLMAPQ14BN4 828 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 FASTKD3Q14CZ7 662 aaKnown RBP18.07■□□□□ 0.48
PHGDH-232ENST00000641947 GAREM2Q75VX8 874 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 RTL3Q8N8U3 475 aaKnown RBP18.07■□□□□ 0.48
PHGDH-232ENST00000641947 HDAC11Q96DB2 347 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 ZFRQ96KR1 1074 aaKnown RBP18.07■□□□□ 0.48
PHGDH-232ENST00000641947 EMILIN2Q9BXX0 1053 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 NOL6Q9H6R4 1146 aaKnown RBP18.07■□□□□ 0.48
PHGDH-232ENST00000641947 ETNK1Q9HBU6 452 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 RAB6BQ9NRW1 208 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 TMEM51Q9NW97 253 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 ZNF212Q9UDV6 495 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 RWDD3Q9Y3V2 267 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 A0A0A0MRY4 1105 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 WASH4PA8MWX3 477 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 F5H423 210 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-232ENST00000641947 KCNK1O00180 336 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 RIPK2O43353 540 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 GLUD1P00367 558 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 OAS2P29728 719 aaKnown RBP18.07■□□□□ 0.48
PHGDH-232ENST00000641947 PBX2P40425 430 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 MSS51Q4VC12 460 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 FAM133BQ5BKY9 247 aaKnown RBP18.07■□□□□ 0.48
PHGDH-232ENST00000641947 SPDYCQ5MJ68 293 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 ANKRD20A2Q5SQ80 823 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 FNBP1LQ5T0N5 605 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 ANKRD20A1Q5TYW2 823 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 ANKRD20A3Q5VUR7 823 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms