RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 SNX10Q9Y5X0 201 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 EXOC1LA0A1B0GW35 172 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 SLC38A8A6NNN8 435 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 C2CD2LO14523 706 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 ADAM12O43184 909 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 METTL18O95568 372 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 APOEP02649 317 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 ATF6P18850 670 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 ATP1A2P50993 1020 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 C1QTNF8P60827 252 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 CDK16Q00536 496 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 ZNF33AQ06730 810 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 GALNT2Q10471 571 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 ACBD5Q5T8D3 534 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-216ENST00000641375 MANEALQ5VSG8 457 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 ANKMY2Q8IV38 441 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 PALM2Q8IXS6 379 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 NPWQ8N729 165 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 CDK5RAP1Q96SZ6 601 aaKnown RBP16.91■□□□□ 0.3
PHGDH-216ENST00000641375 CLSTN3Q9BQT9 956 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 UBE2OQ9C0C9 1292 aaKnown RBP16.91■□□□□ 0.3
PHGDH-216ENST00000641375 CNOT10Q9H9A5 744 aaKnown RBP16.91■□□□□ 0.3
PHGDH-216ENST00000641375 SPG21Q9NZD8 308 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 SLC12A6Q9UHW9 1150 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 NUP205Q92621 2012 aa16.9■□□□□ 0.3
PHGDH-216ENST00000641375 MYO18AQ92614 2054 aaKnown RBP16.9■□□□□ 0.3
PHGDH-216ENST00000641375 ZDHHC11BP0C7U3 371 aa16.9■□□□□ 0.3
PHGDH-216ENST00000641375 RPL17P18621 184 aaKnown RBP16.9■□□□□ 0.3
PHGDH-216ENST00000641375 GARSP41250 739 aaKnown RBP16.9■□□□□ 0.3
PHGDH-216ENST00000641375 EFEMP1Q12805 493 aa16.9■□□□□ 0.3
PHGDH-216ENST00000641375 MTA1Q13330 715 aa16.9■□□□□ 0.3
PHGDH-216ENST00000641375 FAXCQ5TGI0 409 aa16.9■□□□□ 0.3
PHGDH-216ENST00000641375 COLGALT1Q8NBJ5 622 aa16.9■□□□□ 0.3
PHGDH-216ENST00000641375 HERC2P3Q9BVR0 1158 aa16.9■□□□□ 0.3
PHGDH-216ENST00000641375 BANF1O75531 89 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 SPAG6O75602 509 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 ABLIM3O94929 683 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 MOCS2O96007 188 aaPredicted RBP16.89■□□□□ 0.3
PHGDH-216ENST00000641375 KPNA1P52294 538 aaPredicted RBP16.89■□□□□ 0.3
PHGDH-216ENST00000641375 MLLT6P55198 1093 aaPredicted RBP16.89■□□□□ 0.3
PHGDH-216ENST00000641375 COG7P83436 770 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 TRIP4Q15650 581 aaPredicted RBP16.89■□□□□ 0.3
PHGDH-216ENST00000641375 PARP6Q2NL67 630 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 C10orf120Q5SQS8 335 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 RASIP1Q5U651 963 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 C3orf62Q6ZUJ4 267 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 TMCO2Q7Z6W1 182 aaPredicted RBP16.89■□□□□ 0.3
PHGDH-216ENST00000641375 DDX53Q86TM3 631 aaKnown RBP16.89■□□□□ 0.3
PHGDH-216ENST00000641375 PDZD8Q8NEN9 1154 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 GIPC2Q8TF65 315 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 OVCA2Q8WZ82 227 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 LRRC39Q96DD0 335 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 VAT1Q99536 393 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 MARCH2Q9P0N8 246 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 SEPT10Q9P0V9 454 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 STK39Q9UEW8 545 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 FETUBQ9UGM5 382 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 LGALS13Q9UHV8 139 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 NEU3Q9UQ49 428 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 RRP15Q9Y3B9 282 aaKnown RBP16.89■□□□□ 0.3
PHGDH-216ENST00000641375 HS3ST4Q9Y661 456 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 MRPL42Q9Y6G3 142 aaKnown RBP16.89■□□□□ 0.3
PHGDH-216ENST00000641375 TEX264Q9Y6I9 313 aa16.89■□□□□ 0.3
PHGDH-216ENST00000641375 PPM1AP35813 382 aa16.89■□□□□ 0.29
PHGDH-216ENST00000641375 WASHC5Q12768 1159 aa16.89■□□□□ 0.29
PHGDH-216ENST00000641375 SYCP2LQ5T4T6 812 aa16.89■□□□□ 0.29
PHGDH-216ENST00000641375 TADA2BQ86TJ2 420 aa16.89■□□□□ 0.29
PHGDH-216ENST00000641375 TDRPQ86YL5 185 aa16.89■□□□□ 0.29
PHGDH-216ENST00000641375 ZNF276Q8N554 614 aa16.89■□□□□ 0.29
PHGDH-216ENST00000641375 ATP6V0D2Q8N8Y2 350 aa16.89■□□□□ 0.29
PHGDH-216ENST00000641375 NETO2Q8NC67 525 aa16.89■□□□□ 0.29
PHGDH-216ENST00000641375 BTN2A3PQ96KV6 586 aa16.89■□□□□ 0.29
PHGDH-216ENST00000641375 YME1L1Q96TA2 773 aa16.89■□□□□ 0.29
PHGDH-216ENST00000641375 XAB2Q9HCS7 855 aaKnown RBP16.89■□□□□ 0.29
PHGDH-216ENST00000641375 IL23AQ9NPF7 189 aa16.89■□□□□ 0.29
PHGDH-216ENST00000641375 EIF2B3Q9NR50 452 aaKnown RBP16.89■□□□□ 0.29
PHGDH-216ENST00000641375 DONSONQ9NYP3 566 aa16.89■□□□□ 0.29
PHGDH-216ENST00000641375 IGSF9Q9P2J2 1179 aa16.89■□□□□ 0.29
PHGDH-216ENST00000641375 MAGED2Q9UNF1 606 aaPredicted RBP16.89■□□□□ 0.29
PHGDH-216ENST00000641375 CLUHO75153 1309 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 E9PAM4 449 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 URODP06132 367 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 ACRP10323 421 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 ELK3P41970 407 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 GPX6P59796 221 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 IFI35P80217 286 aaPredicted RBP16.88■□□□□ 0.29
PHGDH-216ENST00000641375 TP53INP2Q8IXH6 220 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 ZNF567Q8N184 647 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 FNIP2Q9P278 1114 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 TRHDEQ9UKU6 1024 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 NR2E3Q9Y5X4 410 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 SHROOM3Q8TF72 1996 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 MDH1P40925 334 aaKnown RBP16.88■□□□□ 0.29
PHGDH-216ENST00000641375 TUBP50607 506 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 RING1Q06587 406 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 KLHL38Q2WGJ6 581 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 PID1Q7Z2X4 250 aa16.88■□□□□ 0.29
PHGDH-216ENST00000641375 CAND1Q86VP6 1230 aaKnown RBP16.88■□□□□ 0.29
PHGDH-216ENST00000641375 WDR83Q9BRX9 315 aaKnown RBP16.88■□□□□ 0.29
PHGDH-216ENST00000641375 KLHL8Q9P2G9 620 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms