RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 SLC6A14Q9UN76 642 aa26.09■■□□□ 1.77
VEGFA-230ENST00000640482 MOCS3O95396 460 aa26.08■■□□□ 1.77
VEGFA-230ENST00000640482 ADRB1P08588 477 aa26.08■■□□□ 1.77
VEGFA-230ENST00000640482 CDH5P33151 784 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-230ENST00000640482 NOS2P35228 1153 aa26.08■■□□□ 1.77
VEGFA-230ENST00000640482 KRT31Q15323 416 aa26.08■■□□□ 1.77
VEGFA-230ENST00000640482 WDR45BQ5MNZ6 344 aa26.08■■□□□ 1.77
VEGFA-230ENST00000640482 ZNF366Q8N895 744 aa26.08■■□□□ 1.77
VEGFA-230ENST00000640482 RRN3Q9NYV6 651 aa26.08■■□□□ 1.77
VEGFA-230ENST00000640482 KIAA1522Q9P206 1035 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-230ENST00000640482 F8VZ95 297 aa26.07■■□□□ 1.76
VEGFA-230ENST00000640482 CDX4O14627 284 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-230ENST00000640482 MBD3O95983 291 aa26.07■■□□□ 1.76
VEGFA-230ENST00000640482 IGLV3-19P01714 112 aa26.07■■□□□ 1.76
VEGFA-230ENST00000640482 SERPINF2P08697 491 aa26.07■■□□□ 1.76
VEGFA-230ENST00000640482 CSKP41240 450 aa26.07■■□□□ 1.76
VEGFA-230ENST00000640482 FKBP15Q5T1M5 1219 aa26.07■■□□□ 1.76
VEGFA-230ENST00000640482 TTC39BQ5VTQ0 682 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-230ENST00000640482 CACUL1Q86Y37 369 aa26.07■■□□□ 1.76
VEGFA-230ENST00000640482 NUP58Q9BVL2 599 aa26.07■■□□□ 1.76
VEGFA-230ENST00000640482 GPR174Q9BXC1 333 aa26.07■■□□□ 1.76
VEGFA-230ENST00000640482 SUSD2Q9UGT4 822 aa26.07■■□□□ 1.76
VEGFA-230ENST00000640482 MUC22E2RYF6 1773 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-230ENST00000640482 CKAP5Q14008 2032 aa26.07■■□□□ 1.76
VEGFA-230ENST00000640482 MEI4A8MW99 385 aa26.06■■□□□ 1.76
VEGFA-230ENST00000640482 LSM8O95777 96 aaKnown RBP26.06■■□□□ 1.76
VEGFA-230ENST00000640482 ENGP17813 658 aa26.06■■□□□ 1.76
VEGFA-230ENST00000640482 GFPT1Q06210 699 aaPredicted RBP26.06■■□□□ 1.76
VEGFA-230ENST00000640482 NME3Q13232 169 aa26.06■■□□□ 1.76
VEGFA-230ENST00000640482 STX1AQ16623 288 aa26.06■■□□□ 1.76
VEGFA-230ENST00000640482 FSCBQ5H9T9 825 aa26.06■■□□□ 1.76
VEGFA-230ENST00000640482 RABGAP1LQ5R372 815 aa26.06■■□□□ 1.76
VEGFA-230ENST00000640482 TAF3Q5VWG9 929 aa26.06■■□□□ 1.76
VEGFA-230ENST00000640482 MSANTD4Q8NCY6 345 aa26.06■■□□□ 1.76
VEGFA-230ENST00000640482 ANKRD20A12PQ8NF67 263 aa26.06■■□□□ 1.76
VEGFA-230ENST00000640482 CADM4Q8NFZ8 388 aa26.06■■□□□ 1.76
VEGFA-230ENST00000640482 C18orf8Q96DM3 657 aa26.06■■□□□ 1.76
VEGFA-230ENST00000640482 PRMT1Q99873 361 aaKnown RBP26.06■■□□□ 1.76
VEGFA-230ENST00000640482 PRSS16Q9NQE7 514 aa26.06■■□□□ 1.76
VEGFA-230ENST00000640482 FANCLQ9NW38 375 aa26.06■■□□□ 1.76
VEGFA-230ENST00000640482 INTS6Q9UL03 887 aaKnown RBP26.06■■□□□ 1.76
VEGFA-230ENST00000640482 GNSP15586 552 aa26.05■■□□□ 1.76
VEGFA-230ENST00000640482 MATKP42679 507 aa26.05■■□□□ 1.76
VEGFA-230ENST00000640482 GABRB2P47870 512 aa26.05■■□□□ 1.76
VEGFA-230ENST00000640482 ATXN3P54252 364 aaPredicted RBP26.05■■□□□ 1.76
VEGFA-230ENST00000640482 ZBTB16Q05516 673 aa26.05■■□□□ 1.76
VEGFA-230ENST00000640482 PITRM1Q5JRX3 1037 aa26.05■■□□□ 1.76
VEGFA-230ENST00000640482 ERICH1Q86X53 443 aa26.05■■□□□ 1.76
VEGFA-230ENST00000640482 KDM1BQ8NB78 822 aa26.05■■□□□ 1.76
VEGFA-230ENST00000640482 GANQ9H2C0 597 aa26.05■■□□□ 1.76
VEGFA-230ENST00000640482 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.05■■□□□ 1.764e-6■□□□□ 10.5
VEGFA-230ENST00000640482 STAP1Q9ULZ2 295 aa26.05■■□□□ 1.76
VEGFA-230ENST00000640482 DAAM1Q9Y4D1 1078 aa26.05■■□□□ 1.76
VEGFA-230ENST00000640482 CEP192Q8TEP8 1941 aa26.04■■□□□ 1.76
VEGFA-230ENST00000640482 M0QYT0 321 aa26.04■■□□□ 1.76
VEGFA-230ENST00000640482 KCNK5O95279 499 aa26.04■■□□□ 1.76
VEGFA-230ENST00000640482 C7P10643 843 aa26.04■■□□□ 1.76
VEGFA-230ENST00000640482 SCNN1AP37088 669 aa26.04■■□□□ 1.76
VEGFA-230ENST00000640482 MAPK8P45983 427 aa26.04■■□□□ 1.76
VEGFA-230ENST00000640482 MYL5Q02045 173 aa26.04■■□□□ 1.76
VEGFA-230ENST00000640482 SLC12A1Q13621 1099 aa26.04■■□□□ 1.76
VEGFA-230ENST00000640482 UAP1L1Q3KQV9 507 aa26.04■■□□□ 1.76
VEGFA-230ENST00000640482 CCDC183Q5T5S1 534 aa26.04■■□□□ 1.76
VEGFA-230ENST00000640482 MMS22LQ6ZRQ5 1243 aa26.04■■□□□ 1.76
VEGFA-230ENST00000640482 NOP9Q86U38 636 aaKnown RBP26.04■■□□□ 1.76
VEGFA-230ENST00000640482 ZNF677Q86XU0 584 aa26.04■■□□□ 1.76
VEGFA-230ENST00000640482 CAPN10Q9HC96 672 aa26.04■■□□□ 1.76
VEGFA-230ENST00000640482 A0A1B0GVM2 712 aa26.03■■□□□ 1.76
VEGFA-230ENST00000640482 TCAF2A6NFQ2 919 aa26.03■■□□□ 1.76
VEGFA-230ENST00000640482 DNTTP04053 509 aa26.03■■□□□ 1.76
VEGFA-230ENST00000640482 SRPRAP08240 638 aaKnown RBP26.03■■□□□ 1.76
VEGFA-230ENST00000640482 OXCT1P55809 520 aa26.03■■□□□ 1.76
VEGFA-230ENST00000640482 RNASE9P60153 205 aaKnown RBP26.03■■□□□ 1.76
VEGFA-230ENST00000640482 FAM102AQ5T9C2 384 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-230ENST00000640482 RNF219Q5W0B1 726 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-230ENST00000640482 ZNF776Q68DI1 518 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-230ENST00000640482 EPS8L1Q8TE68 723 aa26.03■■□□□ 1.76
VEGFA-230ENST00000640482 MYO19Q96H55 970 aa26.03■■□□□ 1.76
VEGFA-230ENST00000640482 FAM207AQ9NSI2 230 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-230ENST00000640482 TMEM51Q9NW97 253 aa26.03■■□□□ 1.76
VEGFA-230ENST00000640482 ERVW-1Q9UQF0 538 aa26.03■■□□□ 1.76
VEGFA-230ENST00000640482 LAMA1P25391 3075 aa26.03■■□□□ 1.76
VEGFA-230ENST00000640482 SYPP08247 313 aa26.02■■□□□ 1.76
VEGFA-230ENST00000640482 MMEP08473 750 aa26.02■■□□□ 1.76
VEGFA-230ENST00000640482 POLR2FP61218 127 aaKnown RBP26.02■■□□□ 1.76
VEGFA-230ENST00000640482 RPS14P62263 151 aaKnown RBP26.02■■□□□ 1.76
VEGFA-230ENST00000640482 ECT2LQ008S8 904 aa26.02■■□□□ 1.76
VEGFA-230ENST00000640482 HNRNPA1L2Q32P51 320 aaKnown RBP26.02■■□□□ 1.76
VEGFA-230ENST00000640482 PLEKHG6Q3KR16 790 aa26.02■■□□□ 1.76
VEGFA-230ENST00000640482 TTC31Q49AM3 519 aaPredicted RBP26.02■■□□□ 1.76
VEGFA-230ENST00000640482 SND1Q7KZF4 910 aaKnown RBP eCLIP26.02■■□□□ 1.764e-9■■□□□ 11.7
VEGFA-230ENST00000640482 FAM124AQ86V42 546 aa26.02■■□□□ 1.76
VEGFA-230ENST00000640482 XYLT1Q86Y38 959 aa26.02■■□□□ 1.76
VEGFA-230ENST00000640482 CCAR2Q8N163 923 aaKnown RBP26.02■■□□□ 1.76
VEGFA-230ENST00000640482 DNASE2BQ8WZ79 361 aa26.02■■□□□ 1.76
VEGFA-230ENST00000640482 MRGPRX3Q96LB0 322 aa26.02■■□□□ 1.76
VEGFA-230ENST00000640482 RPRD1AQ96P16 312 aaPredicted RBP26.02■■□□□ 1.76
VEGFA-230ENST00000640482 NPY6RQ99463 290 aa26.02■■□□□ 1.76
VEGFA-230ENST00000640482 GTPBP2Q9BX10 602 aaKnown RBP26.02■■□□□ 1.76
VEGFA-230ENST00000640482 PCED1AQ9H1Q7 454 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms