RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 SPATA6LQ8N4H0 392 aa14.98□□□□□ -0.01
SCARB2-221ENST00000640341 USP33Q8TEY7 942 aa14.98□□□□□ -0.01
SCARB2-221ENST00000640341 DCPSQ96C86 337 aaKnown RBP14.98□□□□□ -0.01
SCARB2-221ENST00000640341 SNX15Q9NRS6 342 aa14.98□□□□□ -0.01
SCARB2-221ENST00000640341 KIAA1257Q9ULG3 409 aa14.98□□□□□ -0.01
SCARB2-221ENST00000640341 PPME1Q9Y570 386 aa14.98□□□□□ -0.01
SCARB2-221ENST00000640341 SCN1AP35498 2009 aa14.98□□□□□ -0.01
SCARB2-221ENST00000640341 RECQL4O94761 1208 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 SERPINE1P05121 402 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 POLBP06746 335 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 KYAT3Q6YP21 454 aaKnown RBP14.97□□□□□ -0.01
SCARB2-221ENST00000640341 FRMD7Q6ZUT3 714 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 SDCCAG8Q86SQ7 713 aaPredicted RBP14.97□□□□□ -0.01
SCARB2-221ENST00000640341 PIGZQ86VD9 579 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 RNF139Q8WU17 664 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 FERMT1Q9BQL6 677 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 PSME4Q14997 1843 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 AP1G2O75843 785 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 LYNP07948 512 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 ZFXP17010 805 aaPredicted RBP14.97□□□□□ -0.01
SCARB2-221ENST00000640341 TCN1P20061 433 aaPredicted RBP14.97□□□□□ -0.01
SCARB2-221ENST00000640341 TPSB2P20231 275 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 PEX2P28328 305 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 SLC26A2P50443 739 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 BST2Q10589 180 aaKnown RBP14.97□□□□□ -0.01
SCARB2-221ENST00000640341 SEMA5AQ13591 1074 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 TPSAB1Q15661 275 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 SYPL2Q5VXT5 272 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 MTHFD1LQ6UB35 978 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 ZNF567Q8N184 647 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 BEST2Q8NFU1 509 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 SLC7A14Q8TBB6 771 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 TRIM4Q9C037 500 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 COPG2Q9UBF2 871 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 TIMM13Q9Y5L4 95 aaPredicted RBP14.97□□□□□ -0.01
SCARB2-221ENST00000640341 GSRP00390 522 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 CHRM1P11229 460 aaPredicted RBP14.97□□□□□ -0.01
SCARB2-221ENST00000640341 ARHGAP1Q07960 439 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 CERCAMQ5T4B2 595 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 OR52E8Q6IFG1 317 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 ARCQ7LC44 396 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 SCYL1Q96KG9 808 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 FCRL3Q96P31 734 aaPredicted RBP14.97□□□□□ -0.01
SCARB2-221ENST00000640341 ZNF408Q9H9D4 720 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 COG4Q9H9E3 785 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 LRRC4Q9HBW1 653 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 SLC39A10Q9ULF5 831 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 PIN4Q9Y237 131 aaKnown RBP14.97□□□□□ -0.01
SCARB2-221ENST00000640341 SNX10Q9Y5X0 201 aa14.97□□□□□ -0.01
SCARB2-221ENST00000640341 MGAMO43451 1857 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 SPTLC1O15269 473 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 BIRC5O15392 142 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 BEST1O76090 585 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 AMHP03971 560 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 TKTP29401 623 aaKnown RBP14.96□□□□□ -0.01
SCARB2-221ENST00000640341 SNX16P57768 344 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 TBL3Q12788 808 aaKnown RBP14.96□□□□□ -0.01
SCARB2-221ENST00000640341 ZNF484Q5JVG2 852 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 FOXB2Q5VYV0 432 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 ACVR1CQ8NER5 493 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 ARNTL2Q8WYA1 636 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 CERS2Q96G23 380 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 GJD2Q9UKL4 321 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 SSC5DA1L4H1 1573 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 CHRNGP07510 517 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 RAG1P15918 1043 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 BCAT1P54687 386 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 ABCE1P61221 599 aaKnown RBP14.96□□□□□ -0.01
SCARB2-221ENST00000640341 GRIK4Q16099 956 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 SLC9B1Q4ZJI4 515 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 FBXO47Q5MNV8 452 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 HFE2Q6ZVN8 426 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 GCOM2Q9BZD3 368 aaPredicted RBP14.96□□□□□ -0.01
SCARB2-221ENST00000640341 RNF39Q9H2S5 420 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 VRTNQ9H8Y1 702 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 DCDC2Q9UHG0 476 aa14.96□□□□□ -0.01
SCARB2-221ENST00000640341 A0A096LPK6 155 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 FAM72CH0Y354 149 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 EEF2KO00418 725 aaKnown RBP14.95□□□□□ -0.02
SCARB2-221ENST00000640341 DPYSL4O14531 572 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 PHGDHO43175 533 aaKnown RBP14.95□□□□□ -0.02
SCARB2-221ENST00000640341 SLC25A27O95847 323 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 PGAM1P18669 254 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 MX2P20592 715 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 IGFBP6P24592 240 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-221ENST00000640341 EPHA3P29320 983 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 MAGEA3P43357 314 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 NR2C2P49116 596 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 NUDT2P50583 147 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 AQP4P55087 323 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 LBRQ14739 615 aaKnown RBP14.95□□□□□ -0.02
SCARB2-221ENST00000640341 PPM1LQ5SGD2 360 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 FAM72AQ5TYM5 149 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 FAM72DQ6L9T8 149 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 FAM72BQ86X60 149 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 MYLK4Q86YV6 388 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-221ENST00000640341 USP13Q92995 863 aaPredicted RBP14.95□□□□□ -0.02
SCARB2-221ENST00000640341 SGF29Q96ES7 293 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 CELF6Q96J87 481 aaKnown RBP14.95□□□□□ -0.02
SCARB2-221ENST00000640341 C20orf96Q9NUD7 363 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms