RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 TAS2R40P59535 323 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 FZD5Q13467 585 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 C5orf22Q49AR2 442 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 FSCBQ5H9T9 825 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 MPP7Q5T2T1 576 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 MANEALQ5VSG8 457 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 GRAMD4Q6IC98 578 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 C1orf228Q6PIY5 440 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 LRRC31Q6UY01 552 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 CCAR2Q8N163 923 aaKnown RBP13.62□□□□□ -0.23
GTF3A-209ENST00000640289 PBXIP1Q96AQ6 731 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 KCTD15Q96SI1 283 aaPredicted RBP13.62□□□□□ -0.23
GTF3A-209ENST00000640289 IRX2Q9BZI1 471 aaPredicted RBP13.62□□□□□ -0.23
GTF3A-209ENST00000640289 DHX35Q9H5Z1 703 aaKnown RBP13.62□□□□□ -0.23
GTF3A-209ENST00000640289 ARHGEF4Q9NR80 690 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 NEU3Q9UQ49 428 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 MRPS17Q9Y2R5 130 aaKnown RBP13.62□□□□□ -0.23
GTF3A-209ENST00000640289 HYOU1Q9Y4L1 999 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 IGLV3-10A0A075B6K4 115 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 A0A1B0GVM2 712 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 TCAF2A6NFQ2 919 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 DRGXA6NNA5 263 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 BTNL10A8MVZ5 291 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.61□□□□□ -0.23
GTF3A-209ENST00000640289 H0Y626 953 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 LUC7L3O95232 432 aaKnown RBP13.61□□□□□ -0.23
GTF3A-209ENST00000640289 RARAP10276 462 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 CHRNB1P11230 501 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 HLA-FP30511 346 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 CD70P32970 193 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 MAN1A1P33908 653 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 NUMBP49757 651 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 NAP1L1P55209 391 aaKnown RBP13.61□□□□□ -0.23
GTF3A-209ENST00000640289 NRG1Q02297 640 aaPredicted RBP13.61□□□□□ -0.23
GTF3A-209ENST00000640289 CCDC173Q0VFZ6 552 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 KIF5AQ12840 1032 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 GRSF1Q12849 480 aaKnown RBP eCLIP13.61□□□□□ -0.23
GTF3A-209ENST00000640289 SEMA3BQ13214 749 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 CCINQ13939 588 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 ATP13A4Q4VNC1 1196 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 ACBD5Q5T8D3 534 aaPredicted RBP13.61□□□□□ -0.23
GTF3A-209ENST00000640289 CCDC105Q8IYK2 499 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 TERB1Q8NA31 727 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 PJA1Q8NG27 643 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 TPCN2Q8NHX9 752 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 HSPH1Q92598 858 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 NCAPGQ9BPX3 1015 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 LMAN1LQ9HAT1 526 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 ABCB8Q9NUT2 735 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 LCMT1Q9UIC8 334 aa13.61□□□□□ -0.23
GTF3A-209ENST00000640289 MACROD2A1Z1Q3 448 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 TBC1D3BA6NDS4 549 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 PRRT4C9JH25 899 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 K7EQS6 105 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 MOCS3O95396 460 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 APODP05090 189 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 DCNP07585 359 aaKnown RBP13.6□□□□□ -0.23
GTF3A-209ENST00000640289 AOC1P19801 751 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 DRD1P21728 446 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 COMTP21964 271 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 L1CAMP32004 1257 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 GRIA2P42262 883 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 CDH4P55283 916 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 SEC13P55735 322 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 LMAN2Q12907 356 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 CDH18Q13634 790 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 HADHQ16836 314 aaKnown RBP13.6□□□□□ -0.23
GTF3A-209ENST00000640289 GEN1Q17RS7 908 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 BOLA3Q53S33 107 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 PPP6R3Q5H9R7 873 aaPredicted RBP13.6□□□□□ -0.23
GTF3A-209ENST00000640289 TTC39BQ5VTQ0 682 aaPredicted RBP13.6□□□□□ -0.23
GTF3A-209ENST00000640289 RWDD4Q6NW29 188 aaKnown RBP13.6□□□□□ -0.23
GTF3A-209ENST00000640289 TFAP2DQ7Z6R9 452 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 PIAS4Q8N2W9 510 aaPredicted RBP13.6□□□□□ -0.23
GTF3A-209ENST00000640289 OR52K2Q8NGK3 314 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 FIBINQ8TAL6 211 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 EXOC4Q96A65 974 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 TBC1D31Q96DN5 1066 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 LMLNQ96KR4 655 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 PPP1R9BQ96SB3 815 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 NELL2Q99435 816 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 SLC2A11Q9BYW1 496 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 ZYG11BQ9C0D3 744 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 KLHL11Q9NVR0 708 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 PPARGC1AQ9UBK2 798 aaKnown RBP13.6□□□□□ -0.23
GTF3A-209ENST00000640289 ZNF212Q9UDV6 495 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 GGA2Q9UJY4 613 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 SLC27A6Q9Y2P4 619 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 SIT1Q9Y3P8 196 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 ALG6Q9Y672 507 aa13.6□□□□□ -0.23
GTF3A-209ENST00000640289 TECTAO75443 2155 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 MUC3AQ02505 3323 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 A0A0A0MRY4 1105 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.59□□□□□ -0.23
GTF3A-209ENST00000640289 CLDN11O75508 207 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 CCDC175P0C221 793 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 PABPC1P11940 636 aaKnown RBP13.59□□□□□ -0.23
GTF3A-209ENST00000640289 TNNT1P13805 278 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 GOT1P17174 413 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 EPHB2P29323 1055 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms