RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 PLA2G6O60733 806 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ITGA2P17301 1181 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 CASP1P29466 404 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 SSTR3P32745 418 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ABL2P42684 1182 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 TAF6P49848 677 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 MEIOBQ8N635 442 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 FAM213AQ9BRX8 229 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 CDH19Q9H159 772 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 TMPRSS11EQ9UL52 423 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ZMYM2Q9UBW7 1377 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 MAP2P11137 1827 aaKnown RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 F5H423 210 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 SLC9A3R1O14745 358 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 PLD2O14939 933 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 PGRMC2O15173 223 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 UPP2O95045 317 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ATP5JP18859 108 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 CNTFP26441 200 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 S100A7P31151 101 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 MAGEA12P43365 314 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 SLC7A5Q01650 507 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 BTKQ06187 659 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 SNAPC2Q13487 334 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 RAB39AQ14964 217 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 E2F4Q16254 413 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 FGD3Q5JSP0 725 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 CDKL4Q5MAI5 379 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 DENND5AQ6IQ26 1287 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 MYO7BQ6PIF6 2116 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 PLCZ1Q86YW0 608 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ZBTB8BQ8NAP8 495 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 IPMKQ8NFU5 416 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 OR7D4Q8NG98 312 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 TPD52L3Q96J77 140 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 FAIM2Q9BWQ8 316 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 TMEM121BQ9BXQ6 578 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 FRMD8P1Q9BZ68 369 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 GANQ9H2C0 597 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 RAB6BQ9NRW1 208 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 KLC4Q9NSK0 619 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 CLN6Q9NWW5 311 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 PIM2Q9P1W9 311 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 AGO2Q9UKV8 859 aaKnown RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 GRIP1Q9Y3R0 1128 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 PLEKHG2Q9H7P9 1386 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 AIPO00170 330 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 DHX15O43143 795 aaKnown RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 FAM20BO75063 409 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 RBP1P09455 135 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 AMD1P17707 334 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ACOX1Q15067 660 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 RNF43Q68DV7 783 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 FAM228AQ86W67 206 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 ANKRD13CQ8N6S4 541 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 DNAAF1Q8NEP3 725 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 SSH3Q8TE77 659 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 AGAP3Q96P47 875 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 SLC52A2Q9HAB3 445 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 NAGPAQ9UK23 515 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 NR2E3Q9Y5X4 410 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 NCAM2O15394 837 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 SRCP12931 536 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 RAB4AP20338 218 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 DNASE1L1P49184 302 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 RBL2Q08999 1139 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 VAC14Q08AM6 782 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 KNOP1Q1ED39 458 aaKnown RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 EIF3MQ7L2H7 374 aaKnown RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 INO80EQ8NBZ0 244 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 TRPV1Q8NER1 839 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 FAM20AQ96MK3 541 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 PPP1R10Q96QC0 940 aaKnown RBP6.13□□□□□ -1.43
SCN1A-212ENST00000636194 OMDQ99983 421 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 SETD4Q9NVD3 440 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 SPATA7Q9P0W8 599 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 CCDC88AQ3V6T2 1871 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 GTF3C1Q12789 2109 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 GRIN2DO15399 1336 aa6.13□□□□□ -1.43
SCN1A-212ENST00000636194 RRN3P2A6NIE6 340 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SAGE2PA6NJ88 616 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 PDE2AO00408 941 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 RAD51BO15315 384 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 TLX3O43711 291 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 RTN2O75298 545 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 TCN1P20061 433 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 RPL4P36578 427 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 CASRP41180 1078 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 PTGER2P43116 358 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 RPL21P46778 160 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 OR1G1P47890 313 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 CREMQ03060 361 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 MBTD1Q05BQ5 628 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 VPS72Q15906 364 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 CERCAMQ5T4B2 595 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 TRAPPC11Q7Z392 1133 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 TRMT11Q7Z4G4 463 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SNX20Q7Z614 316 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 PANX3Q96QZ0 392 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms