RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 GRXCR2A6NFK2 248 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 ALOX15BO15296 676 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 AHCYL1O43865 530 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 CYP1A1P04798 512 aaPredicted RBP15.98■□□□□ 0.15
CLN8-209ENST00000635970 FESP07332 822 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 KRT15P19012 456 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 TARSP26639 723 aaKnown RBP15.98■□□□□ 0.15
CLN8-209ENST00000635970 ZRSR2Q15696 482 aaKnown RBP15.98■□□□□ 0.15
CLN8-209ENST00000635970 P3H1Q32P28 736 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 MGAT5BQ3V5L5 792 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 HHATQ5VTY9 493 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 CCDC149Q6ZUS6 474 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 LONP2Q86WA8 852 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 RCOR2Q8IZ40 523 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 UBR7Q8N806 425 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 C12orf29Q8N999 325 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 STKLD1Q8NE28 680 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 RBM41Q96IZ5 413 aaKnown RBP15.98■□□□□ 0.15
CLN8-209ENST00000635970 SAYSD1Q9NPB0 183 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 ACP6Q9NPH0 428 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 DNAJC17Q9NVM6 304 aaKnown RBP15.98■□□□□ 0.15
CLN8-209ENST00000635970 DPP7Q9UHL4 492 aa15.98■□□□□ 0.15
CLN8-209ENST00000635970 R3HDM2Q9Y2K5 976 aaKnown RBP15.98■□□□□ 0.15
CLN8-209ENST00000635970 TYROBPO43914 113 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 TJP3O95049 919 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 T-ENOLP0DO92 83 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 TROVE2P10155 538 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLN8-209ENST00000635970 KRT5P13647 590 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 HOXB8P17481 243 aaPredicted RBP15.97■□□□□ 0.15
CLN8-209ENST00000635970 TBXAS1P24557 533 aaPredicted RBP15.97■□□□□ 0.15
CLN8-209ENST00000635970 CYP2F1P24903 491 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 GCAP28676 217 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 PCK1P35558 622 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 ABL2P42684 1182 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 GPR15P49685 360 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 TWF1Q12792 350 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 LEXMQ3ZCV2 418 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 NAIF1Q69YI7 327 aaPredicted RBP15.97■□□□□ 0.15
CLN8-209ENST00000635970 PCGF5Q86SE9 256 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 SLC24A3Q9HC58 644 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 FAM49BQ9NUQ9 324 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 ZDHHC7Q9NXF8 308 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 PSMC3IPQ9P2W1 217 aaPredicted RBP15.97■□□□□ 0.15
CLN8-209ENST00000635970 NKX1-2Q9UD57 310 aaPredicted RBP15.97■□□□□ 0.15
CLN8-209ENST00000635970 PCDHB5Q9Y5E4 795 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 GREB1Q4ZG55 1949 aa15.97■□□□□ 0.15
CLN8-209ENST00000635970 FAM170AA1A519 330 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 CLDN5O00501 218 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 MBTPS2O43462 519 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 CCDC22O60826 627 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 CCDC130P13994 396 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 ACO1P21399 889 aaKnown RBP15.96■□□□□ 0.15
CLN8-209ENST00000635970 NFE2Q16621 373 aaPredicted RBP15.96■□□□□ 0.15
CLN8-209ENST00000635970 ELMSAN1Q6PJG2 1045 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 CENPUQ71F23 418 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 MON1BQ7L1V2 547 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 UNC93AQ86WB7 457 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 SPATA2LQ8IUW3 424 aaPredicted RBP15.96■□□□□ 0.15
CLN8-209ENST00000635970 SPPL2BQ8TCT7 592 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 TNIP3Q96KP6 325 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 HERPUD2Q9BSE4 406 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 NT5C1AQ9BXI3 368 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 HCFC1R1Q9NWW0 138 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 ZFP69BQ9UJL9 534 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 SHOC2Q9UQ13 582 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 FOXO6A8MYZ6 492 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 TM9SF1O15321 606 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 LIASO43766 372 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 LRG1P02750 347 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 NEFHP12036 1026 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 ATF6P18850 670 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 CA4P22748 312 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 BDNFP23560 247 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 PHBP35232 272 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 PTPN7P35236 360 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 VPS41P49754 854 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 CACNA2D1P54289 1103 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 KLC1Q07866 573 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 LRRC38Q5VT99 294 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 SDHAF4Q5VUM1 108 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 SLC4A11Q8NBS3 891 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 GPR152Q8TDT2 470 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 SMG7Q92540 1137 aaKnown RBP15.96■□□□□ 0.15
CLN8-209ENST00000635970 B3GNT5Q9BYG0 378 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 PRKD2Q9BZL6 878 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 ZNF518BQ9C0D4 1074 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 VCXQ9H320 206 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 TMEM30AQ9NV96 361 aa15.96■□□□□ 0.15
CLN8-209ENST00000635970 PATJQ8NI35 1801 aa15.96■□□□□ 0.14
CLN8-209ENST00000635970 A0A0C4DFX4 3053 aa15.96■□□□□ 0.14
CLN8-209ENST00000635970 SKAP2O75563 359 aaPredicted RBP15.95■□□□□ 0.14
CLN8-209ENST00000635970 CALCAP01258 141 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 HAPLN1P10915 354 aaPredicted RBP15.95■□□□□ 0.14
CLN8-209ENST00000635970 IL9P15248 144 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 HOXA9P31269 272 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 SMARCB1Q12824 385 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 SMAD4Q13485 552 aaKnown RBP15.95■□□□□ 0.14
CLN8-209ENST00000635970 SMYD5Q6GMV2 418 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 PLEKHA7Q6IQ23 1121 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 PTCRAQ6ISU1 281 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms