RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 DMC1Q14565 340 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 CCNG2Q16589 344 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 SLC9C1Q4G0N8 1177 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 C6orf163Q5TEZ5 329 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 PDPK2PQ6A1A2 396 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 PPP1R2P3Q6NXS1 205 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 ERAP2Q6P179 960 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 CNSTQ6PJW8 725 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.56□□□□□ -1.04
SMN2-214ENST00000626847 C8orf86Q6ZUL3 223 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 C15orf52Q6ZUT6 534 aaKnown RBP8.56□□□□□ -1.04
SMN2-214ENST00000626847 CHSY3Q70JA7 882 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 PIGWQ7Z7B1 504 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 TCAIMQ8N3R3 496 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 RIBC1Q8N443 379 aaPredicted RBP8.56□□□□□ -1.04
SMN2-214ENST00000626847 ANKRD42Q8N9B4 389 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 PCYOX1LQ8NBM8 494 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 SSH3Q8TE77 659 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 ACDQ96AP0 544 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 SHISA4Q96DD7 197 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 CHMP6Q96FZ7 201 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 KLHDC7BQ96G42 594 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 MFSD14AQ96MC6 490 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 ZNF560Q96MR9 790 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 DEPDC7Q96QD5 511 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 CRAMP1Q96RY5 1269 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 YME1L1Q96TA2 773 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 ACAT2Q9BWD1 397 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 PACSIN1Q9BY11 444 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 DDX47Q9H0S4 455 aaKnown RBP8.56□□□□□ -1.04
SMN2-214ENST00000626847 CCDC86Q9H6F5 360 aaKnown RBP8.56□□□□□ -1.04
SMN2-214ENST00000626847 ATP13A3Q9H7F0 1226 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 TRIM45Q9H8W5 580 aaPredicted RBP8.56□□□□□ -1.04
SMN2-214ENST00000626847 CRLF2Q9HC73 371 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 ASNSD1Q9NWL6 643 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 BAG5Q9UL15 447 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 ARHGAP26Q9UNA1 814 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 POLHQ9Y253 713 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 POLR3KQ9Y2Y1 108 aaPredicted RBP8.56□□□□□ -1.04
SMN2-214ENST00000626847 MRPL42Q9Y6G3 142 aaKnown RBP8.56□□□□□ -1.04
SMN2-214ENST00000626847 HEG1Q9ULI3 1381 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 KDM3AQ9Y4C1 1321 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 EYSQ5T1H1 3165 aa8.56□□□□□ -1.04
SMN2-214ENST00000626847 CACNA1GO43497 2377 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 CYP3A7-CYP3A51PA0A087WV96 503 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 ILVBLA1L0T0 632 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 DBX1A6NMT0 343 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 H0Y626 953 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 KPNA4O00629 521 aaPredicted RBP8.55□□□□□ -1.04
SMN2-214ENST00000626847 ACOX3O15254 700 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 AKAP10O43572 662 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 PSIP1O75475 530 aaKnown RBP8.55□□□□□ -1.04
SMN2-214ENST00000626847 DNAJB5O75953 348 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 USP1O94782 785 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 VSIG8P0DPA2 414 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 TMEM11P17152 192 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 DRD4P21917 467 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 CYP3A7P24462 503 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 HLA-FP30511 346 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 SOX5P35711 763 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 MTIF2P46199 727 aaKnown RBP8.55□□□□□ -1.04
SMN2-214ENST00000626847 CDK8P49336 464 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 CLK3P49761 638 aaKnown RBP8.55□□□□□ -1.04
SMN2-214ENST00000626847 AP1S2P56377 157 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 CCNA1P78396 465 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 XIAPP98170 497 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 SPAG1Q07617 926 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 TRPC3Q13507 836 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 SF3B4Q15427 424 aaKnown RBP eCLIP8.55□□□□□ -1.04
SMN2-214ENST00000626847 ARHGAP44Q17R89 818 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 SMU1Q2TAY7 513 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 TBRG1Q3YBR2 411 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 HP1BP3Q5SSJ5 553 aaPredicted RBP8.55□□□□□ -1.04
SMN2-214ENST00000626847 DCDC5Q6ZRR9 648 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 ASRGL1Q7L266 308 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 PRUNE1Q86TP1 453 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 TSPYL5Q86VY4 417 aaPredicted RBP8.55□□□□□ -1.04
SMN2-214ENST00000626847 LSRQ86X29 649 aaPredicted RBP8.55□□□□□ -1.04
SMN2-214ENST00000626847 ZNF354CQ86Y25 554 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 TMTC1Q8IUR5 882 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 COLGALT2Q8IYK4 626 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 RFWD2Q8NHY2 731 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 PANK1Q8TE04 598 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 INPP5DQ92835 1189 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 PLPPR2Q96GM1 343 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 LRGUKQ96M69 825 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 KATNAL1Q9BW62 490 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 TEX13BQ9BXU2 312 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 ANKRD2Q9GZV1 360 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 RNF38Q9H0F5 515 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 ECT2Q9H8V3 914 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 LY9Q9HBG7 655 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 NLRC4Q9NPP4 1024 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 SNTG2Q9NY99 539 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 DNAJB4Q9UDY4 337 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 GTF2IRD1Q9UHL9 959 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 TDRKHQ9Y2W6 561 aaKnown RBP8.55□□□□□ -1.04
SMN2-214ENST00000626847 CSNK1G3Q9Y6M4 447 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 TTC28Q96AY4 2481 aa8.55□□□□□ -1.04
SMN2-214ENST00000626847 A0A0A6YYJ9 748 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms