RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 TRIM62Q9BVG3 475 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 MIS12Q9H081 205 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 MRPL18Q9H0U6 180 aaKnown RBP6.68□□□□□ -1.34
TCF4-249ENST00000625716 EPC1Q9H2F5 836 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 PDCL3Q9H2J4 239 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 NDST4Q9H3R1 872 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 DNAJC17Q9NVM6 304 aaKnown RBP6.68□□□□□ -1.34
TCF4-249ENST00000625716 ANO10Q9NW15 660 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 APEX2Q9UBZ4 518 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 DNAJC12Q9UKB3 198 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 SMG5Q9UPR3 1016 aaKnown RBP6.68□□□□□ -1.34
TCF4-249ENST00000625716 PTPRDP23468 1912 aa6.68□□□□□ -1.34
TCF4-249ENST00000625716 ZNF638Q14966 1978 aaKnown RBP6.68□□□□□ -1.34
TCF4-249ENST00000625716 OBSL1O75147 1896 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 CCDC163A0A0D9SF12 145 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 YJEFN3A6XGL0 299 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 E7ENQ6 273 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 K7EQS6 105 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 K7ESF4 209 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 TULP2O00295 520 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 CAPN9O14815 690 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 HOXC11O43248 304 aaPredicted RBP6.67□□□□□ -1.34
TCF4-249ENST00000625716 TULP3O75386 442 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 RPP40O75818 363 aaKnown RBP6.67□□□□□ -1.34
TCF4-249ENST00000625716 STC2O76061 302 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 ALDH1A2O94788 518 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 APBB3O95704 486 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 CALCAP01258 141 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 LTFP02788 710 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 TDGF1P13385 188 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 TYRP14679 529 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 CDK11BP21127 795 aaKnown RBP6.67□□□□□ -1.34
TCF4-249ENST00000625716 PON1P27169 355 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 CORO1AP31146 461 aaKnown RBP6.67□□□□□ -1.34
TCF4-249ENST00000625716 HOXA6P31267 233 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 KRT9P35527 623 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 PXNP49023 591 aaPredicted RBP6.67□□□□□ -1.34
TCF4-249ENST00000625716 DGKEP52429 567 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 ZNF132P52740 706 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 DAOAP59103 153 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 BPIFB4P59827 614 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 RAPGEF1Q13905 1077 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 DMC1Q14565 340 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 E2F5Q15329 346 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 STX1AQ16623 288 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 HSF5Q4G112 596 aaPredicted RBP6.67□□□□□ -1.34
TCF4-249ENST00000625716 TCP11X2Q5H9J9 407 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 EOGTQ5NDL2 527 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 FKBP15Q5T1M5 1219 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 C10orf76Q5T2E6 689 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 LAIR1Q6GTX8 287 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 PKN3Q6P5Z2 889 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 GJB7Q6PEY0 223 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.67□□□□□ -1.34
TCF4-249ENST00000625716 WDR5BQ86VZ2 330 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 IRF2BP1Q8IU81 584 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 FMNL3Q8IVF7 1028 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 KIAA2013Q8IYS2 634 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 AGGF1Q8N302 714 aaeCLIP6.67□□□□□ -1.341e-6■■■□□ 15.3
TCF4-249ENST00000625716 CCDC33Q8N5R6 958 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 SUMF1Q8NBK3 374 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 ENOX1Q8TC92 643 aaKnown RBP6.67□□□□□ -1.34
TCF4-249ENST00000625716 GPT2Q8TD30 523 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 DDI1Q8WTU0 396 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 SLC35F5Q8WV83 523 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 ZNF606Q8WXB4 792 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 NDRG1Q92597 394 aaKnown RBP6.67□□□□□ -1.34
TCF4-249ENST00000625716 WBP2Q969T9 261 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 FAM149B1Q96BN6 582 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 HHIPQ96QV1 700 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 MED15Q96RN5 788 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 NAT10Q9H0A0 1025 aaKnown RBP6.67□□□□□ -1.34
TCF4-249ENST00000625716 SYNCQ9H7C4 482 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 SAMSN1Q9NSI8 373 aaKnown RBP6.67□□□□□ -1.34
TCF4-249ENST00000625716 KCNK4Q9NYG8 393 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 BCCIPQ9P287 314 aaKnown RBP eCLIP6.67□□□□□ -1.34
TCF4-249ENST00000625716 CNTN6Q9UQ52 1028 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 HBS1LQ9Y450 684 aaKnown RBP6.67□□□□□ -1.34
TCF4-249ENST00000625716 NFE2L3Q9Y4A8 694 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 CEP83Q9Y592 693 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 DENND4CQ5VZ89 1909 aa6.67□□□□□ -1.34
TCF4-249ENST00000625716 GREB1Q4ZG55 1949 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 LINC01387J3KSC0 135 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 CACNG3O60359 315 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 GREM1O60565 184 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 WISP1O95388 367 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 KLF8O95600 359 aaPredicted RBP6.66□□□□□ -1.34
TCF4-249ENST00000625716 NCAM1P13591 858 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 GPD2P43304 727 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 SLC11A2P49281 568 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 TBX4P57082 545 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 ZNF445P59923 1031 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 APBA1Q02410 837 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 ARID5AQ03989 594 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 DMWDQ09019 674 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 BYSLQ13895 437 aaKnown RBP6.66□□□□□ -1.34
TCF4-249ENST00000625716 LPAL2Q16609 132 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 MEA1Q16626 185 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 GAB4Q2WGN9 574 aa6.66□□□□□ -1.34
TCF4-249ENST00000625716 MPPE1Q53F39 396 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms