RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 OMA1Q96E52 524 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 FBXL18Q96ME1 805 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 APOL6Q9BWW8 343 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 KCTD10Q9H3F6 313 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 POLR1BQ9H9Y6 1135 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 PLEKHA5Q9HAU0 1116 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 SNTG2Q9NY99 539 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 SEPT10Q9P0V9 454 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 PCDHB13Q9Y5F0 798 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 SNX5Q9Y5X3 404 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 MAGEB6P1A0A0J9YX57 407 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 B8ZZF3 427 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 RTCAO00442 366 aaKnown RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 AREL1O15033 823 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 SCO2O43819 266 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 CALUO43852 315 aaPredicted RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 LRRN2O75325 713 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 IL32P24001 234 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 BMPR1AP36894 532 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 NAMPTP43490 491 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 MRPS15P82914 257 aaKnown RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 FCHO2Q0JRZ9 810 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 HSPA14Q0VDF9 509 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 PPP2R5DQ14738 602 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 CALCRLQ16602 461 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 ABCB5Q2M3G0 1257 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 FSCBQ5H9T9 825 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 TAS1R3Q7RTX0 852 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 DSG4Q86SJ6 1040 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 CARM1Q86X55 608 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 CATSPER3Q86XQ3 398 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 TANKQ92844 425 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 TMA16Q96EY4 203 aaKnown RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 MECRQ9BV79 373 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 TMEM9Q9P0T7 183 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 STK39Q9UEW8 545 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 CCNL1Q9UK58 526 aaPredicted RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 CNOT11Q9UKZ1 510 aaKnown RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 DNM3Q9UQ16 869 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 MYO3BQ8WXR4 1341 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 AKAP11Q9UKA4 1901 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 COL4A1P02462 1669 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 ESYT2A0FGR8 921 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 FAM25EA8MYX2 175 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 GAS7O60861 476 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 TOMM70O94826 608 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 CDH1P12830 882 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 CTRB1P17538 263 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 EPHA3P29320 983 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 ETV4P43268 484 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 GPD2P43304 727 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 ATXN3P54252 364 aaPredicted RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 MAP3K7CLP57077 242 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 FAPQ12884 760 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 PMS2P3Q13401 168 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 RAB39AQ14964 217 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 UBE2SQ16763 222 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 RSBN1Q5VWQ0 802 aaPredicted RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 CTRB2Q6GPI1 263 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 UTS2BQ765I0 119 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.1□□□□□ -1.11
VPS11-209ENST00000622309 PALM2Q8IXS6 379 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 LILRA2Q8N149 483 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 SLC7A3Q8WY07 619 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 DNAJC19Q96DA6 116 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 YME1L1Q96TA2 773 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 DOK1Q99704 481 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 NPLQ9BXD5 320 aaPredicted RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 WDR12Q9GZL7 423 aaKnown RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 ATP13A3Q9H7F0 1226 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 COQ10BQ9H8M1 238 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 ZNF395Q9H8N7 513 aaPredicted RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 GMIPQ9P107 970 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 ATPIF1Q9UII2 106 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 PTBP2Q9UKA9 531 aaKnown RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 GTPBP10A4D1E9 387 aaKnown RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 C7orf72A4D263 438 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 A8MX80 341 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 DNALI1O14645 258 aaPredicted RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 SNPHO15079 494 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 DEAF1O75398 565 aaPredicted RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 ZMPSTE24O75844 475 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 POLR2CP19387 275 aaPredicted RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 ITIH1P19827 911 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 SSTR1P30872 391 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 RAD23AP54725 363 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 MYL6P60660 151 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 PRKCQQ04759 706 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 GPS1Q13098 491 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 PEX6Q13608 980 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 DPYSQ14117 519 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 INAVAQ3KP66 663 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 SH3BP5LQ7L8J4 393 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 SPARTQ8N0X7 666 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 DEPDC4Q8N2C3 294 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 CFAP36Q96G28 342 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 ZNF717Q9BY31 904 aaPredicted RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 OR2B2Q9GZK3 357 aa8.1□□□□□ -1.11
VPS11-209ENST00000622309 NAA50Q9GZZ1 169 aaKnown RBP8.1□□□□□ -1.11
VPS11-209ENST00000622309 TRPV6Q9H1D0 765 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms