RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TEKT5Q96M29 485 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 KLHL1Q9NR64 748 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 PCDHB7Q9Y5E2 793 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 PSMG1O95456 288 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 SERPINA1P01009 418 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 CD4P01730 458 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 CRABP2P29373 138 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 BNIP2Q12982 314 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 SLC45A4Q5BKX6 768 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 GNASQ5JWF2 1037 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 KYAT3Q6YP21 454 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 PTCD3Q96EY7 689 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 DCUN1D5Q9BTE7 237 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 SPATA5L1Q9BVQ7 753 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 REEP1Q9H902 201 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 COPS7BQ9H9Q2 264 aaPredicted RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 HPS4Q9NQG7 708 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 MKLN1Q9UL63 735 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 USP42Q9H9J4 1324 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 C2CD2LO14523 706 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 S100A2P29034 98 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 BNIP1Q12981 228 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 DPYSQ14117 519 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 USP50Q70EL3 339 aaPredicted RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 MYO1HQ8N1T3 1032 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 MIER2Q8N344 545 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 UTP15Q8TED0 518 aaKnown RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 ITFG2Q969R8 447 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 ZHX1-C8orf76Q96EF9 292 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 OXNAD1Q96HP4 312 aaPredicted RBP7.32□□□□□ -1.24
COLCA1-205ENST00000620864 PLEKHG4BQ96PX9 1271 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 RMDN3Q96TC7 470 aa7.32□□□□□ -1.24
COLCA1-205ENST00000620864 STX16-NPEPL1H3BU86 382 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 STX16O14662 325 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 TPST1O60507 370 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 GPC1P35052 558 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 S100A12P80511 92 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 POLD3Q15054 466 aaPredicted RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PYHIN1Q6K0P9 492 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 LLGL2Q6P1M3 1020 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 MSANTD1Q6ZTZ1 278 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 RAB43Q86YS6 212 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 TTC29Q8NA56 475 aaPredicted RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 SLC38A2Q96QD8 506 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ERGIC2Q96RQ1 377 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 TMEM39BQ9GZU3 492 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 SMURF2Q9HAU4 748 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 CLK4Q9HAZ1 481 aaKnown RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 SLC38A7Q9NVC3 462 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 GTF3C4Q9UKN8 822 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 TBX3O15119 743 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 RHOBTB3O94955 611 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 HPGDP15428 266 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 LBPP18428 481 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 POU1F1P28069 291 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 RPL22P35268 128 aaKnown RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 HPCAL1P37235 193 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 RPL3P39023 403 aaKnown RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 RFC5P40937 340 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 FMO5P49326 533 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 DLG1Q12959 904 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ERAP2Q6P179 960 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 SLC13A5Q86YT5 568 aaPredicted RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 RASGRP4Q8TDF6 673 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 GIPC3Q8TF64 312 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 SENP6Q9GZR1 1112 aaPredicted RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 GIN1Q9NXP7 522 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 SHOC2Q9UQ13 582 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 NR5A2O00482 541 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ASS1P00966 412 aaKnown RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 LRG1P02750 347 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 FOSL1P15407 271 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 VAV1P15498 845 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PDGFRAP16234 1089 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PRDX5P30044 214 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 CPA2P48052 419 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ATG14Q6ZNE5 492 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 TMEM199Q8N511 208 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 GTF3C2Q8WUA4 911 aaPredicted RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 EMILIN2Q9BXX0 1053 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 MUC13Q9H3R2 512 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 UPB1Q9UBR1 384 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ANAPC2Q9UJX6 822 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 SSR3Q9UNL2 185 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 DYRK1BQ9Y463 629 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PCDHGA10Q9Y5H3 936 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ACTL7BQ9Y614 415 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 TET3O43151 1660 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 RGSL1A5PLK6 1076 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PER1O15534 1290 aaPredicted RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 TMCC2O75069 709 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 KHDRBS3O75525 346 aaKnown RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 UCHL3P15374 230 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 CBX5P45973 191 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 KCTD21Q4G0X4 260 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 AKIRIN2Q53H80 203 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PYDC2Q56P42 97 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ERICH5Q6P6B1 374 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 MEIOBQ8N635 442 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF302Q9NR11 478 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms