RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ZNF212Q9UDV6 495 aa14.07□□□□□ -0.16
NEK3-210ENST00000620675 CACNA1IQ9P0X4 2223 aa14.07□□□□□ -0.16
NEK3-210ENST00000620675 IGLV3-10A0A075B6K4 115 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 SPECC1L-ADORA2AF8WAN1 911 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 TULP3O75386 442 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 ADH1CP00326 375 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 DESP17661 470 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 IL4RP24394 825 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 CTHP32929 405 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 DNA2P51530 1060 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 RWDD4Q6NW29 188 aaKnown RBP14.06□□□□□ -0.16
NEK3-210ENST00000620675 RNF10Q8N5U6 811 aaKnown RBP14.06□□□□□ -0.16
NEK3-210ENST00000620675 ALG3Q92685 438 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 ETNK2Q9NVF9 386 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 VPS13AQ96RL7 3174 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 DRGXA6NNA5 263 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 HOXC11O43248 304 aaPredicted RBP14.06□□□□□ -0.16
NEK3-210ENST00000620675 SLC34A2O95436 690 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 SLC1A1P43005 524 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 CDH6P55285 790 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 ZXDAP98168 799 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 KDSRQ06136 332 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 DPYSL2Q16555 572 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 HADHQ16836 314 aaKnown RBP14.06□□□□□ -0.16
NEK3-210ENST00000620675 C5orf22Q49AR2 442 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 MPPE1Q53F39 396 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 BOLA3Q53S33 107 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 RNF43Q68DV7 783 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 AADACL2Q6P093 401 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 TPRG1Q6ZUI0 275 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 POLNQ7Z5Q5 900 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 TXLNBQ8N3L3 684 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 CARNMT1Q8N4J0 409 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 HJURPQ8NCD3 748 aaPredicted RBP14.06□□□□□ -0.16
NEK3-210ENST00000620675 EZH1Q92800 747 aaPredicted RBP14.06□□□□□ -0.16
NEK3-210ENST00000620675 DNASE1L2Q92874 299 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 TRPV5Q9NQA5 729 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 USP34Q70CQ2 3546 aa14.06□□□□□ -0.16
NEK3-210ENST00000620675 C3orf70A6NLC5 250 aaPredicted RBP14.05□□□□□ -0.16
NEK3-210ENST00000620675 PDGFBP01127 241 aaPredicted RBP14.05□□□□□ -0.16
NEK3-210ENST00000620675 HLA-FP30511 346 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 GAD2Q05329 585 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 DPYSL3Q14195 570 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 TP53INP2Q8IXH6 220 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 SIX5Q8N196 739 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 PHTF2Q8N3S3 785 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 TEKT4Q8WW24 435 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 RNF25Q96BH1 459 aaPredicted RBP14.05□□□□□ -0.16
NEK3-210ENST00000620675 ZSCAN12O43309 604 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 CACNG3O60359 315 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 CISD3P0C7P0 127 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 AMPD1P23109 780 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 EPHB2P29323 1055 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 CD70P32970 193 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 GALK1P51570 392 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 AIF1P55008 147 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 NRG1Q02297 640 aaPredicted RBP14.05□□□□□ -0.16
NEK3-210ENST00000620675 PON2Q15165 354 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 MLF2Q15773 248 aaPredicted RBP14.05□□□□□ -0.16
NEK3-210ENST00000620675 CXorf57Q6NSI4 855 aaKnown RBP14.05□□□□□ -0.16
NEK3-210ENST00000620675 NLRP14Q86W24 1093 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 RHOT1Q8IXI2 618 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 TSC1Q92574 1164 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 DDX50Q9BQ39 737 aaKnown RBP14.05□□□□□ -0.16
NEK3-210ENST00000620675 HERPUD2Q9BSE4 406 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 ZDHHC4Q9NPG8 344 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 ARHGEF3Q9NR81 526 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 DNAJC17Q9NVM6 304 aaKnown RBP14.05□□□□□ -0.16
NEK3-210ENST00000620675 DNAI1Q9UI46 699 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 FBXL21Q9UKT6 434 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 MTF2Q9Y483 593 aaPredicted RBP14.05□□□□□ -0.16
NEK3-210ENST00000620675 DMDP11532 3685 aa14.05□□□□□ -0.16
NEK3-210ENST00000620675 WDR87Q6ZQQ6 2873 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 LRRD1A4D1F6 860 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 EEF2KO00418 725 aaKnown RBP14.04□□□□□ -0.16
NEK3-210ENST00000620675 FANCGO15287 622 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 DDX3YO15523 660 aaKnown RBP14.04□□□□□ -0.16
NEK3-210ENST00000620675 KDELR1P24390 212 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 HOXC13P31276 330 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 PEX5P50542 639 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 TPI1P60174 286 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 PFKPQ01813 784 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 GEN1Q17RS7 908 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 ZFYVE27Q5T4F4 411 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 DCAF12L1Q5VU92 463 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 TMEM215Q68D42 235 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 MFSD7Q6UXD7 560 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 PEX26Q7Z412 305 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 FAM71BQ8TC56 605 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 TBC1D31Q96DN5 1066 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 LMLNQ96KR4 655 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 CSPG4P5Q96PW8 444 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 NCAPGQ9BPX3 1015 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 COL25A1Q9BXS0 654 aaPredicted RBP14.04□□□□□ -0.16
NEK3-210ENST00000620675 FOXQ1Q9C009 403 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 ABCB8Q9NUT2 735 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 LCMT1Q9UIC8 334 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 FBXO10Q9UK96 956 aa14.04□□□□□ -0.16
NEK3-210ENST00000620675 INTS6Q9UL03 887 aaKnown RBP14.04□□□□□ -0.16
NEK3-210ENST00000620675 LUC7L3O95232 432 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms