RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 SLC6A14Q9UN76 642 aa26.09■■□□□ 1.77
VEGFA-228ENST00000617771 MOCS3O95396 460 aa26.08■■□□□ 1.77
VEGFA-228ENST00000617771 ADRB1P08588 477 aa26.08■■□□□ 1.77
VEGFA-228ENST00000617771 CDH5P33151 784 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-228ENST00000617771 NOS2P35228 1153 aa26.08■■□□□ 1.77
VEGFA-228ENST00000617771 KRT31Q15323 416 aa26.08■■□□□ 1.77
VEGFA-228ENST00000617771 WDR45BQ5MNZ6 344 aa26.08■■□□□ 1.77
VEGFA-228ENST00000617771 ZNF366Q8N895 744 aa26.08■■□□□ 1.77
VEGFA-228ENST00000617771 RRN3Q9NYV6 651 aa26.08■■□□□ 1.77
VEGFA-228ENST00000617771 KIAA1522Q9P206 1035 aaPredicted RBP26.08■■□□□ 1.77
VEGFA-228ENST00000617771 F8VZ95 297 aa26.07■■□□□ 1.76
VEGFA-228ENST00000617771 CDX4O14627 284 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-228ENST00000617771 MBD3O95983 291 aa26.07■■□□□ 1.76
VEGFA-228ENST00000617771 IGLV3-19P01714 112 aa26.07■■□□□ 1.76
VEGFA-228ENST00000617771 SERPINF2P08697 491 aa26.07■■□□□ 1.76
VEGFA-228ENST00000617771 CSKP41240 450 aa26.07■■□□□ 1.76
VEGFA-228ENST00000617771 FKBP15Q5T1M5 1219 aa26.07■■□□□ 1.76
VEGFA-228ENST00000617771 TTC39BQ5VTQ0 682 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-228ENST00000617771 CACUL1Q86Y37 369 aa26.07■■□□□ 1.76
VEGFA-228ENST00000617771 NUP58Q9BVL2 599 aa26.07■■□□□ 1.76
VEGFA-228ENST00000617771 GPR174Q9BXC1 333 aa26.07■■□□□ 1.76
VEGFA-228ENST00000617771 SUSD2Q9UGT4 822 aa26.07■■□□□ 1.76
VEGFA-228ENST00000617771 MUC22E2RYF6 1773 aaPredicted RBP26.07■■□□□ 1.76
VEGFA-228ENST00000617771 CKAP5Q14008 2032 aa26.07■■□□□ 1.76
VEGFA-228ENST00000617771 MEI4A8MW99 385 aa26.06■■□□□ 1.76
VEGFA-228ENST00000617771 LSM8O95777 96 aaKnown RBP26.06■■□□□ 1.76
VEGFA-228ENST00000617771 ENGP17813 658 aa26.06■■□□□ 1.76
VEGFA-228ENST00000617771 GFPT1Q06210 699 aaPredicted RBP26.06■■□□□ 1.76
VEGFA-228ENST00000617771 NME3Q13232 169 aa26.06■■□□□ 1.76
VEGFA-228ENST00000617771 STX1AQ16623 288 aa26.06■■□□□ 1.76
VEGFA-228ENST00000617771 FSCBQ5H9T9 825 aa26.06■■□□□ 1.76
VEGFA-228ENST00000617771 RABGAP1LQ5R372 815 aa26.06■■□□□ 1.76
VEGFA-228ENST00000617771 TAF3Q5VWG9 929 aa26.06■■□□□ 1.76
VEGFA-228ENST00000617771 MSANTD4Q8NCY6 345 aa26.06■■□□□ 1.76
VEGFA-228ENST00000617771 ANKRD20A12PQ8NF67 263 aa26.06■■□□□ 1.76
VEGFA-228ENST00000617771 CADM4Q8NFZ8 388 aa26.06■■□□□ 1.76
VEGFA-228ENST00000617771 C18orf8Q96DM3 657 aa26.06■■□□□ 1.76
VEGFA-228ENST00000617771 PRMT1Q99873 361 aaKnown RBP26.06■■□□□ 1.76
VEGFA-228ENST00000617771 PRSS16Q9NQE7 514 aa26.06■■□□□ 1.76
VEGFA-228ENST00000617771 FANCLQ9NW38 375 aa26.06■■□□□ 1.76
VEGFA-228ENST00000617771 INTS6Q9UL03 887 aaKnown RBP26.06■■□□□ 1.76
VEGFA-228ENST00000617771 GNSP15586 552 aa26.05■■□□□ 1.76
VEGFA-228ENST00000617771 MATKP42679 507 aa26.05■■□□□ 1.76
VEGFA-228ENST00000617771 GABRB2P47870 512 aa26.05■■□□□ 1.76
VEGFA-228ENST00000617771 ATXN3P54252 364 aaPredicted RBP26.05■■□□□ 1.76
VEGFA-228ENST00000617771 ZBTB16Q05516 673 aa26.05■■□□□ 1.76
VEGFA-228ENST00000617771 PITRM1Q5JRX3 1037 aa26.05■■□□□ 1.76
VEGFA-228ENST00000617771 ERICH1Q86X53 443 aa26.05■■□□□ 1.76
VEGFA-228ENST00000617771 KDM1BQ8NB78 822 aa26.05■■□□□ 1.76
VEGFA-228ENST00000617771 GANQ9H2C0 597 aa26.05■■□□□ 1.76
VEGFA-228ENST00000617771 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.05■■□□□ 1.764e-6■□□□□ 10.5
VEGFA-228ENST00000617771 STAP1Q9ULZ2 295 aa26.05■■□□□ 1.76
VEGFA-228ENST00000617771 DAAM1Q9Y4D1 1078 aa26.05■■□□□ 1.76
VEGFA-228ENST00000617771 CEP192Q8TEP8 1941 aa26.04■■□□□ 1.76
VEGFA-228ENST00000617771 M0QYT0 321 aa26.04■■□□□ 1.76
VEGFA-228ENST00000617771 KCNK5O95279 499 aa26.04■■□□□ 1.76
VEGFA-228ENST00000617771 C7P10643 843 aa26.04■■□□□ 1.76
VEGFA-228ENST00000617771 SCNN1AP37088 669 aa26.04■■□□□ 1.76
VEGFA-228ENST00000617771 MAPK8P45983 427 aa26.04■■□□□ 1.76
VEGFA-228ENST00000617771 MYL5Q02045 173 aa26.04■■□□□ 1.76
VEGFA-228ENST00000617771 SLC12A1Q13621 1099 aa26.04■■□□□ 1.76
VEGFA-228ENST00000617771 UAP1L1Q3KQV9 507 aa26.04■■□□□ 1.76
VEGFA-228ENST00000617771 CCDC183Q5T5S1 534 aa26.04■■□□□ 1.76
VEGFA-228ENST00000617771 MMS22LQ6ZRQ5 1243 aa26.04■■□□□ 1.76
VEGFA-228ENST00000617771 NOP9Q86U38 636 aaKnown RBP26.04■■□□□ 1.76
VEGFA-228ENST00000617771 ZNF677Q86XU0 584 aa26.04■■□□□ 1.76
VEGFA-228ENST00000617771 CAPN10Q9HC96 672 aa26.04■■□□□ 1.76
VEGFA-228ENST00000617771 A0A1B0GVM2 712 aa26.03■■□□□ 1.76
VEGFA-228ENST00000617771 TCAF2A6NFQ2 919 aa26.03■■□□□ 1.76
VEGFA-228ENST00000617771 DNTTP04053 509 aa26.03■■□□□ 1.76
VEGFA-228ENST00000617771 SRPRAP08240 638 aaKnown RBP26.03■■□□□ 1.76
VEGFA-228ENST00000617771 OXCT1P55809 520 aa26.03■■□□□ 1.76
VEGFA-228ENST00000617771 RNASE9P60153 205 aaKnown RBP26.03■■□□□ 1.76
VEGFA-228ENST00000617771 FAM102AQ5T9C2 384 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-228ENST00000617771 RNF219Q5W0B1 726 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-228ENST00000617771 ZNF776Q68DI1 518 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-228ENST00000617771 EPS8L1Q8TE68 723 aa26.03■■□□□ 1.76
VEGFA-228ENST00000617771 MYO19Q96H55 970 aa26.03■■□□□ 1.76
VEGFA-228ENST00000617771 FAM207AQ9NSI2 230 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-228ENST00000617771 TMEM51Q9NW97 253 aa26.03■■□□□ 1.76
VEGFA-228ENST00000617771 ERVW-1Q9UQF0 538 aa26.03■■□□□ 1.76
VEGFA-228ENST00000617771 LAMA1P25391 3075 aa26.03■■□□□ 1.76
VEGFA-228ENST00000617771 SYPP08247 313 aa26.02■■□□□ 1.76
VEGFA-228ENST00000617771 MMEP08473 750 aa26.02■■□□□ 1.76
VEGFA-228ENST00000617771 POLR2FP61218 127 aaKnown RBP26.02■■□□□ 1.76
VEGFA-228ENST00000617771 RPS14P62263 151 aaKnown RBP26.02■■□□□ 1.76
VEGFA-228ENST00000617771 ECT2LQ008S8 904 aa26.02■■□□□ 1.76
VEGFA-228ENST00000617771 HNRNPA1L2Q32P51 320 aaKnown RBP26.02■■□□□ 1.76
VEGFA-228ENST00000617771 PLEKHG6Q3KR16 790 aa26.02■■□□□ 1.76
VEGFA-228ENST00000617771 TTC31Q49AM3 519 aaPredicted RBP26.02■■□□□ 1.76
VEGFA-228ENST00000617771 SND1Q7KZF4 910 aaKnown RBP eCLIP26.02■■□□□ 1.764e-9■■□□□ 11.7
VEGFA-228ENST00000617771 FAM124AQ86V42 546 aa26.02■■□□□ 1.76
VEGFA-228ENST00000617771 XYLT1Q86Y38 959 aa26.02■■□□□ 1.76
VEGFA-228ENST00000617771 CCAR2Q8N163 923 aaKnown RBP26.02■■□□□ 1.76
VEGFA-228ENST00000617771 DNASE2BQ8WZ79 361 aa26.02■■□□□ 1.76
VEGFA-228ENST00000617771 MRGPRX3Q96LB0 322 aa26.02■■□□□ 1.76
VEGFA-228ENST00000617771 RPRD1AQ96P16 312 aaPredicted RBP26.02■■□□□ 1.76
VEGFA-228ENST00000617771 NPY6RQ99463 290 aa26.02■■□□□ 1.76
VEGFA-228ENST00000617771 GTPBP2Q9BX10 602 aaKnown RBP26.02■■□□□ 1.76
VEGFA-228ENST00000617771 PCED1AQ9H1Q7 454 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms