RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 ZNF530Q6P9A1 599 aaPredicted RBP3.99□□□□□ -1.77
CBWD1-224ENST00000616803 CLEC17AQ6ZS10 378 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 SRGAP1Q7Z6B7 1085 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 FMNL3Q8IVF7 1028 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 WDR75Q8IWA0 830 aaKnown RBP3.99□□□□□ -1.77
CBWD1-224ENST00000616803 HSCBQ8IWL3 235 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 ZNF548Q8NEK5 533 aaPredicted RBP3.99□□□□□ -1.77
CBWD1-224ENST00000616803 C16orf52Q8NHV5 167 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 SUN3Q8TAQ9 357 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 LRRC59Q96AG4 307 aaKnown RBP3.99□□□□□ -1.77
CBWD1-224ENST00000616803 LTV1Q96GA3 475 aaPredicted RBP3.99□□□□□ -1.77
CBWD1-224ENST00000616803 USP29Q9HBJ7 922 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 TUBA8Q9NY65 449 aaPredicted RBP3.99□□□□□ -1.77
CBWD1-224ENST00000616803 TFCP2L1Q9NZI6 479 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 FZD4Q9ULV1 537 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 ADCY9O60503 1353 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 CPDO75976 1380 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 COL15A1P39059 1388 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 TMEM94Q12767 1356 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 UBR2Q8IWV8 1755 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 PAPPAQ13219 1627 aa3.99□□□□□ -1.77
CBWD1-224ENST00000616803 SHANK3Q9BYB0 1731 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 UTYO14607 1347 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 USP42Q9H9J4 1324 aaKnown RBP3.98□□□□□ -1.77
CBWD1-224ENST00000616803 KDM6AO15550 1401 aaPredicted RBP3.98□□□□□ -1.77
CBWD1-224ENST00000616803 TNS3Q68CZ2 1445 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 BTBD19C9JJ37 291 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 TMEM232C9JQI7 657 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 UBE2Q2LH0YL09 131 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 M0QZQ0 153 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 EPB41L2O43491 1005 aaKnown RBP3.98□□□□□ -1.77
CBWD1-224ENST00000616803 KCNQ3O43525 872 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 USP1O94782 785 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 ATICP31939 592 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 FAM193AP78312 1265 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 ZNF91Q05481 1191 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 ZNF543Q08ER8 600 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 ZNF260Q3ZCT1 412 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 LEXMQ3ZCV2 418 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 AASDHQ4L235 1098 aaPredicted RBP3.98□□□□□ -1.77
CBWD1-224ENST00000616803 C10orf25Q5T742 122 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 SHC4Q6S5L8 630 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 FYTTD1Q96QD9 318 aaKnown RBP3.98□□□□□ -1.77
CBWD1-224ENST00000616803 DDX21Q9NR30 783 aaKnown RBP eCLIP3.98□□□□□ -1.77
CBWD1-224ENST00000616803 CHPF2Q9P2E5 772 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 HEY2Q9UBP5 337 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 DNAJB11Q9UBS4 358 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 NKX1-2Q9UD57 310 aaPredicted RBP3.98□□□□□ -1.77
CBWD1-224ENST00000616803 RGS17Q9UGC6 210 aaPredicted RBP3.98□□□□□ -1.77
CBWD1-224ENST00000616803 VPS4AQ9UN37 437 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 PCDHB2Q9Y5E7 798 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 LRRFIP2Q9Y608 721 aaKnown RBP3.98□□□□□ -1.77
CBWD1-224ENST00000616803 MEGF6O75095 1541 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 ARFGEF2Q9Y6D5 1785 aa3.98□□□□□ -1.77
CBWD1-224ENST00000616803 TTC3P53804 2025 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 NHSL1Q5SYE7 1610 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 KPNA5O15131 536 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 TLR2O60603 784 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 UBTFL1P0CB47 393 aaPredicted RBP3.97□□□□□ -1.77
CBWD1-224ENST00000616803 MX1P20591 662 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 PTGER1P34995 402 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 IDUAP35475 653 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 RAE1P78406 368 aaKnown RBP3.97□□□□□ -1.77
CBWD1-224ENST00000616803 TEFQ10587 303 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 DNASE1L3Q13609 305 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 KCNB1Q14721 858 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 KPNB1Q14974 876 aaKnown RBP3.97□□□□□ -1.77
CBWD1-224ENST00000616803 ACOX1Q15067 660 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 GFOD2Q3B7J2 385 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 CERKLQ49MI3 558 aaPredicted RBP3.97□□□□□ -1.77
CBWD1-224ENST00000616803 C1orf141Q5JVX7 400 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 RAP1GAP2Q684P5 730 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 CRTC1Q6UUV9 634 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 KSR2Q6VAB6 950 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 KIAA0408Q6ZU52 694 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 RAB11FIP4Q86YS3 637 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 YAF2Q8IY57 180 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 PNPLA1Q8N8W4 532 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 DNAAF4Q8WXU2 420 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 FAM227BQ96M60 508 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 GDF15Q99988 308 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 LRRCC1Q9C099 1032 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 TMEM8AQ9HCN3 771 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 DBF4Q9UBU7 674 aaPredicted RBP3.97□□□□□ -1.77
CBWD1-224ENST00000616803 ZNF212Q9UDV6 495 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 TCEAL9Q9UHQ7 104 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 FAM50BQ9Y247 325 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 EXOC6BQ9Y2D4 811 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 SIRT4Q9Y6E7 314 aaPredicted RBP3.97□□□□□ -1.77
CBWD1-224ENST00000616803 NUP188Q5SRE5 1749 aa3.97□□□□□ -1.77
CBWD1-224ENST00000616803 AFDNP55196 1824 aaKnown RBP3.97□□□□□ -1.77
CBWD1-224ENST00000616803 NPHP3Q7Z494 1330 aa3.96□□□□□ -1.77
CBWD1-224ENST00000616803 TJP1Q07157 1748 aa3.96□□□□□ -1.78
CBWD1-224ENST00000616803 FSD2A1L4K1 749 aa3.96□□□□□ -1.78
CBWD1-224ENST00000616803 PI4KAP2A4QPH2 592 aa3.96□□□□□ -1.78
CBWD1-224ENST00000616803 A8MVJ9 347 aa3.96□□□□□ -1.78
CBWD1-224ENST00000616803 M0R3H8 397 aa3.96□□□□□ -1.78
CBWD1-224ENST00000616803 DSCR3O14972 297 aa3.96□□□□□ -1.78
CBWD1-224ENST00000616803 TMPRSS11DO60235 418 aa3.96□□□□□ -1.78
CBWD1-224ENST00000616803 PQBP1O60828 265 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms