RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 GLIS2Q9BZE0 524 aaPredicted RBP6.84□□□□□ -1.32
LMO3-235ENST00000616247 ILKAPQ9H0C8 392 aaPredicted RBP6.84□□□□□ -1.32
LMO3-235ENST00000616247 MRPL46Q9H2W6 279 aaKnown RBP6.84□□□□□ -1.32
LMO3-235ENST00000616247 POLR1BQ9H9Y6 1135 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 FAM49BQ9NUQ9 324 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 FAIMQ9NVQ4 179 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 ASNSD1Q9NWL6 643 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 AP4S1Q9Y587 144 aa6.84□□□□□ -1.32
LMO3-235ENST00000616247 EP400Q96L91 3159 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 DLEC1Q9Y238 1755 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 IRS2Q9Y4H2 1338 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 KIAA1551Q9HCM1 1747 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 SH3PXD2BA1X283 911 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 RGSL1A5PLK6 1076 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 ZNF839A8K0R7 811 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 CCNE2O96020 404 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 GRK2P25098 689 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 CA8P35219 290 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 GARSP41250 739 aaKnown RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 GJA8P48165 433 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 NAGLUP54802 743 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 TAP1Q03518 808 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 RELAQ04206 551 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 SULT2A1Q06520 285 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 NR1D2Q14995 579 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 ADRM1Q16186 407 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 FAM91A1Q658Y4 838 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 HEATR6Q6AI08 1181 aaKnown RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 TMEM53Q6P2H8 277 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 SH2D5Q6ZV89 423 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 CAND1Q86VP6 1230 aaKnown RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 IFNLR1Q8IU57 520 aaPredicted RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 CROCCP3Q8IVE0 287 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 OFCC1Q8IZS5 231 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 TMEM130Q8N3G9 435 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 NAT16Q8N8M0 369 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 GABPB2Q8TAK5 448 aaPredicted RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 CASP10Q92851 521 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 PPP1R16BQ96T49 567 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 APBA2Q99767 749 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 EBNA1BP2Q99848 306 aaKnown RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 APOL2Q9BQE5 337 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 TASP1Q9H6P5 420 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 EFCAB1Q9HAE3 211 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 AFG3L2Q9Y4W6 797 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 PPME1Q9Y570 386 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 PCDHA10Q9Y5I2 948 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 MYO18AQ92614 2054 aaKnown RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 SMCHD1A6NHR9 2005 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 CROCCQ5TZA2 2017 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 K7EPI3 171 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 TRDMT1O14717 391 aaKnown RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 CHADO15335 359 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 CBFA2T3O75081 653 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 FBXO21O94952 628 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 PIGNO95427 931 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 UGT1A6P19224 532 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 GARTP22102 1010 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 CDH3P22223 829 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 UGT1A1P22309 533 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 UGT1A4P22310 534 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 EEF1DP29692 281 aaKnown RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 UGT1A3P35503 534 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 UGT1A5P35504 534 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 TCF7P36402 384 aaPredicted RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 YAP1P46937 504 aaKnown RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 HSPA13P48723 471 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 CDK9P50750 372 aaKnown RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 YWHAEP62258 255 aaKnown RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 SNRPFP62306 86 aaKnown RBP6.83□□□□□ -1.32
LMO3-235ENST00000616247 DMPKQ09013 629 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 KCNJ11Q14654 390 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 PCLAFQ15004 111 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 SEL1L3Q68CR1 1132 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 ZFP1Q6P2D0 407 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 KCNT2Q6UVM3 1135 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 RNF135Q8IUD6 432 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 SPATA6LQ8N4H0 392 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 ARFGAP1Q8N6T3 406 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 ATP6V0A1Q93050 837 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 RTKNQ9BST9 563 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 EFHD1Q9BUP0 239 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 KLHL25Q9H0H3 589 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 EPB41L1Q9H4G0 881 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 FAM96AQ9H5X1 160 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 CCDC167Q9P0B6 97 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 COPG2Q9UBF2 871 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 DCDC2Q9UHG0 476 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 SLC39A10Q9ULF5 831 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 ARAP2Q8WZ64 1704 aa6.83□□□□□ -1.32
LMO3-235ENST00000616247 C7orf72A4D263 438 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 PLOD2O00469 737 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 E2F6O75461 281 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 ALDOAP04075 364 aaKnown RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 HDCP19113 662 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 HOXD12P35452 270 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 PCYT1AP49585 367 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 TPD52P55327 224 aaPredicted RBP6.82□□□□□ -1.32
LMO3-235ENST00000616247 PRKCEQ02156 737 aa6.82□□□□□ -1.32
LMO3-235ENST00000616247 SLC25A11Q02978 314 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms