RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 SLC35B2Q8TB61 432 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 VCPIP1Q96JH7 1222 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 ZFYVE28Q9HCC9 887 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 ZDHHC7Q9NXF8 308 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 NYAP2Q9P242 653 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 TJP2Q9UDY2 1190 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 EGFL7Q9UHF1 273 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 COMMD10Q9Y6G5 202 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 CEPT1Q9Y6K0 416 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 HEATR9A2RTY3 570 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 BIRC5O15392 142 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 TRIM13O60858 407 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 NDST2P52849 883 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 CDH8P55286 799 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 PSME3P61289 254 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 YWHAEP62258 255 aaKnown RBP16■□□□□ 0.15
SYNRG-223ENST00000616179 PTP4A2Q12974 167 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 GK5Q6ZS86 529 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 SAPCD2Q86UD0 394 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 SPATA6LQ8N4H0 392 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 UBR7Q8N806 425 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 SREK1IP1Q8N9Q2 155 aaPredicted RBP16■□□□□ 0.15
SYNRG-223ENST00000616179 SLC7A3Q8WY07 619 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 DCPSQ96C86 337 aaKnown RBP16■□□□□ 0.15
SYNRG-223ENST00000616179 RMDN3Q96TC7 470 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 SEPHS2Q99611 448 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 SACM1LQ9NTJ5 587 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 SEPT3Q9UH03 358 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 GINS2Q9Y248 185 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 MYH11P35749 1972 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 A0A096LPK6 155 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 EXTL3O43909 919 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 SDC4P31431 198 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 GTF2BQ00403 316 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 CYP2A13Q16696 494 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 FUT11Q495W5 492 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 KDELC2Q7Z4H8 507 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 BBS5Q8N3I7 341 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 ZCCHC7Q8N3Z6 543 aaKnown RBP16■□□□□ 0.15
SYNRG-223ENST00000616179 OR5B17Q8NGF7 314 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 OLIG1Q8TAK6 271 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 SDCCAG3Q96C92 435 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 OXCT2Q9BYC2 517 aaPredicted RBP16■□□□□ 0.15
SYNRG-223ENST00000616179 FRMD8Q9BZ67 464 aaPredicted RBP16■□□□□ 0.15
SYNRG-223ENST00000616179 FBXO40Q9UH90 709 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 ST14Q9Y5Y6 855 aa16■□□□□ 0.15
SYNRG-223ENST00000616179 VARSP26640 1264 aaKnown RBP15.99■□□□□ 0.15
SYNRG-223ENST00000616179 NFIL3Q16649 462 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 ZNF667Q5HYK9 610 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 OGFRL1Q5TC84 451 aaPredicted RBP15.99■□□□□ 0.15
SYNRG-223ENST00000616179 CPNE9Q8IYJ1 553 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 TNS2Q63HR2 1409 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 PTGES3LE9PB15 166 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 RNASEH2AO75792 299 aaKnown RBP15.99■□□□□ 0.15
SYNRG-223ENST00000616179 SRP72O76094 671 aaKnown RBP15.99■□□□□ 0.15
SYNRG-223ENST00000616179 OXSR1O95747 527 aaPredicted RBP15.99■□□□□ 0.15
SYNRG-223ENST00000616179 CCNA2P20248 432 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 MMP8P22894 467 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 IL1R2P27930 398 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 TPTEP56180 551 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 INAQ16352 499 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 DCAF6Q58WW2 860 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 DENND1BQ6P3S1 775 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 PHF13Q86YI8 300 aaPredicted RBP15.99■□□□□ 0.15
SYNRG-223ENST00000616179 CBR4Q8N4T8 237 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 LINC00116Q8NCU8 138 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 ISOC1Q96CN7 298 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 RIT2Q99578 217 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 SENP6Q9GZR1 1112 aaPredicted RBP15.99■□□□□ 0.15
SYNRG-223ENST00000616179 FADS3Q9Y5Q0 445 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 INO80B-WBP1J3KQ70 363 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 PHGDHO43175 533 aaKnown RBP15.99■□□□□ 0.15
SYNRG-223ENST00000616179 PLIN3O60664 434 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 LRCH4O75427 683 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 RFPL1O75677 317 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 SPRP35270 261 aaPredicted RBP15.99■□□□□ 0.15
SYNRG-223ENST00000616179 CDKL3Q8IVW4 592 aaPredicted RBP15.99■□□□□ 0.15
SYNRG-223ENST00000616179 TMEM161BQ8NDZ6 487 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 LPGAT1Q92604 370 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 INO80BQ9C086 356 aaPredicted RBP15.99■□□□□ 0.15
SYNRG-223ENST00000616179 SIRPGQ9P1W8 387 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 EFR3BQ9Y2G0 817 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 PCDHAC2Q9Y5I4 1007 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 ATRNL1Q5VV63 1379 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 TRDMT1O14717 391 aaKnown RBP15.99■□□□□ 0.15
SYNRG-223ENST00000616179 KLF11O14901 512 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 DAB1O75553 588 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 CCDC81Q6ZN84 652 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 KBTBD6Q86V97 674 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 DACH2Q96NX9 599 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 FIZ1Q96SL8 496 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 OMDQ99983 421 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 PTPRHQ9HD43 1115 aa15.99■□□□□ 0.15
SYNRG-223ENST00000616179 KCPQ6ZWJ8 1503 aa15.98■□□□□ 0.15
SYNRG-223ENST00000616179 A8MU76 341 aa15.98■□□□□ 0.15
SYNRG-223ENST00000616179 KCNU1A8MYU2 1149 aa15.98■□□□□ 0.15
SYNRG-223ENST00000616179 DENRO43583 198 aaKnown RBP15.98■□□□□ 0.15
SYNRG-223ENST00000616179 MFN2O95140 757 aa15.98■□□□□ 0.15
SYNRG-223ENST00000616179 CHRNGP07510 517 aa15.98■□□□□ 0.15
SYNRG-223ENST00000616179 CPOXP36551 454 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms