RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 MSI1O43347 362 aaKnown RBP19.67■□□□□ 0.74
MMP28-204ENST00000615136 PQBP1O60828 265 aaKnown RBP19.67■□□□□ 0.74
MMP28-204ENST00000615136 TADA2AO75478 443 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 IGLV3-25P01717 112 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 CCNB1P14635 433 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 NQO1P15559 274 aaKnown RBP19.67■□□□□ 0.74
MMP28-204ENST00000615136 AIF1P55008 147 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 WASHC5Q12768 1159 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 EIF4EBP2Q13542 120 aaPredicted RBP19.67■□□□□ 0.74
MMP28-204ENST00000615136 C4orf50Q6ZRC1 276 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 PRPF39Q86UA1 669 aaKnown RBP19.67■□□□□ 0.74
MMP28-204ENST00000615136 DEPDC1BQ8WUY9 529 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 SPATA13Q96N96 652 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 OSER1Q9NX31 292 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 MARCH5Q9NX47 278 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 SEPT10Q9P0V9 454 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 KANSL3Q9P2N6 904 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 OR12D3Q9UGF7 316 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 USH1CQ9Y6N9 552 aa19.67■□□□□ 0.74
MMP28-204ENST00000615136 HACD1B0YJ81 288 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 NT5C1B-RDH14C9J2C7 533 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 RIPK1Q13546 671 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 ASRGL1Q7L266 308 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 TBC1D1Q86TI0 1168 aaPredicted RBP19.66■□□□□ 0.74
MMP28-204ENST00000615136 CASP10Q92851 521 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 CFAP36Q96G28 342 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 RRN3Q9NYV6 651 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 PCDHB7Q9Y5E2 793 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 NUP205Q92621 2012 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 IQANK1A0A1B0GTG1 560 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 ARHGEF37A1IGU5 675 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 KCNK1O00180 336 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 SOAT2O75908 522 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 LRIG2O94898 1065 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 F9P00740 461 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 C1QAP02745 245 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 ALADP13716 330 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 ATN1P54259 1190 aaPredicted RBP19.66■□□□□ 0.74
MMP28-204ENST00000615136 BFSP2Q13515 415 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 SEMA5AQ13591 1074 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 FAM171A1Q5VUB5 890 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 C4orf22Q6V702 233 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 TMEM173Q86WV6 379 aaPredicted RBP19.66■□□□□ 0.74
MMP28-204ENST00000615136 ZNF276Q8N554 614 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 COLGALT1Q8NBJ5 622 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 GPR152Q8TDT2 470 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 ZNF75CPQ92670 426 aaPredicted RBP19.66■□□□□ 0.74
MMP28-204ENST00000615136 CD248Q9HCU0 757 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 ADAM28Q9UKQ2 775 aa19.66■□□□□ 0.74
MMP28-204ENST00000615136 SF3B1O75533 1304 aaKnown RBP eCLIP19.65■□□□□ 0.74
MMP28-204ENST00000615136 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.65■□□□□ 0.74
MMP28-204ENST00000615136 ATP6V1G2O95670 118 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 ADRA1DP25100 572 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 MAGEA3P43357 314 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 SLC11A1P49279 550 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 GLUD2P49448 558 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 USP46P62068 366 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 KCNJ2P63252 427 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 ARHGEF6Q15052 776 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 ARL13BQ3SXY8 428 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 KBTBD12Q3ZCT8 623 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 ABI1Q8IZP0 508 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 ZNF567Q8N184 647 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 CRIPAKQ8N1N5 446 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 ATAD1Q8NBU5 361 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 TCP10LQ8TDR4 215 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 C10orf82Q8WW14 230 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 RNF34Q969K3 372 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 PAK6Q9NQU5 681 aaPredicted RBP19.65■□□□□ 0.74
MMP28-204ENST00000615136 ARHGEF3Q9NR81 526 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 PIH1D1Q9NWS0 290 aaKnown RBP19.65■□□□□ 0.74
MMP28-204ENST00000615136 NEU3Q9UQ49 428 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 TTLL3Q9Y4R7 772 aa19.65■□□□□ 0.74
MMP28-204ENST00000615136 A0A1W2PQH9 124 aa19.64■□□□□ 0.74
MMP28-204ENST00000615136 IRAK2O43187 625 aa19.64■□□□□ 0.74
MMP28-204ENST00000615136 TPSB2P20231 275 aa19.64■□□□□ 0.74
MMP28-204ENST00000615136 PRMT2P55345 433 aa19.64■□□□□ 0.74
MMP28-204ENST00000615136 CCL23P55773 120 aa19.64■□□□□ 0.74
MMP28-204ENST00000615136 PDK1Q15118 436 aa19.64■□□□□ 0.74
MMP28-204ENST00000615136 TPSAB1Q15661 275 aa19.64■□□□□ 0.74
MMP28-204ENST00000615136 ARTNQ5T4W7 220 aa19.64■□□□□ 0.74
MMP28-204ENST00000615136 RSPO2Q6UXX9 243 aaPredicted RBP19.64■□□□□ 0.74
MMP28-204ENST00000615136 BZW1Q7L1Q6 419 aaKnown RBP19.64■□□□□ 0.74
MMP28-204ENST00000615136 MCUQ8NE86 351 aa19.64■□□□□ 0.74
MMP28-204ENST00000615136 KLHL29Q96CT2 875 aa19.64■□□□□ 0.74
MMP28-204ENST00000615136 SIGLEC10Q96LC7 697 aa19.64■□□□□ 0.74
MMP28-204ENST00000615136 VPS11Q9H270 941 aa19.64■□□□□ 0.74
MMP28-204ENST00000615136 ELAC1Q9H777 363 aaKnown RBP19.64■□□□□ 0.74
MMP28-204ENST00000615136 UNC5CO95185 931 aa19.64■□□□□ 0.73
MMP28-204ENST00000615136 PSMB4P28070 264 aa19.64■□□□□ 0.73
MMP28-204ENST00000615136 EPHB2P29323 1055 aa19.64■□□□□ 0.73
MMP28-204ENST00000615136 HCAR3P49019 387 aa19.64■□□□□ 0.73
MMP28-204ENST00000615136 SLC18A2Q05940 514 aa19.64■□□□□ 0.73
MMP28-204ENST00000615136 CTXN3Q4LDR2 81 aa19.64■□□□□ 0.73
MMP28-204ENST00000615136 BTBD8Q5XKL5 378 aa19.64■□□□□ 0.73
MMP28-204ENST00000615136 SH2D5Q6ZV89 423 aa19.64■□□□□ 0.73
MMP28-204ENST00000615136 OTOAQ7RTW8 1153 aa19.64■□□□□ 0.73
MMP28-204ENST00000615136 PDCD7Q8N8D1 485 aaKnown RBP19.64■□□□□ 0.73
MMP28-204ENST00000615136 SIK2Q9H0K1 926 aa19.64■□□□□ 0.73
MMP28-204ENST00000615136 PRDM16Q9HAZ2 1276 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms