RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 TAF1CQ15572 869 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 TDRD10Q5VZ19 366 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 RNF180Q86T96 592 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 NT5DC4Q86YG4 428 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 RAB43Q86YS6 212 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 UNC45BQ8IWX7 931 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 DNERQ8NFT8 737 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 RP9Q8TA86 221 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 PNPT1Q8TCS8 783 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 ATG4AQ8WYN0 398 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 TAMM41Q96BW9 452 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 PTCD3Q96EY7 689 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 ELP3Q9H9T3 547 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 KBTBD4Q9NVX7 518 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 VAV3Q9UKW4 847 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 MAPRE3Q9UPY8 281 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 ANKRD6Q9Y2G4 727 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 RAD54BQ9Y620 910 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 CCNE2O96020 404 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 SHBGP04278 402 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 S100A6P06703 90 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 RBP1P09455 135 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 HSMCR30P0CW71 290 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 PSMA3P25788 255 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 HPCAP84074 193 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 CYP51A1Q16850 503 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 FUT11Q495W5 492 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 CACHD1Q5VU97 1274 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 NIPAL1Q6NVV3 410 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 SHQ1Q6PI26 577 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 TTC7BQ86TV6 843 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 STX12Q86Y82 276 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 DENND6AQ8IWF6 608 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 AADATQ8N5Z0 425 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 POU5F2Q8N7G0 328 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 GALNT6Q8NCL4 622 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 RNFT2Q96EX2 444 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 TMEM109Q9BVC6 243 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 MAF1Q9H063 256 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 KRCC1Q9NPI7 259 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 MRPL39Q9NYK5 338 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 CDH9Q9ULB4 789 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 AAR2Q9Y312 384 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 RBMX2Q9Y388 322 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 PCDHB7Q9Y5E2 793 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 CPS1P31327 1500 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 A8MUI8 341 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 SOAT2O75908 522 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 ZBTB11O95625 1053 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 NMT1P30419 496 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 HARS2P49590 506 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 BNIP2Q12982 314 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 ARHGEF7Q14155 803 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 FASTKQ14296 549 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 STK32CQ86UX6 486 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 ATG16L2Q8NAA4 619 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 LINC00116Q8NCU8 138 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 PIWIL2Q8TC59 973 aaKnown RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 ART4Q93070 314 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 ZNF669Q96BR6 464 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-211ENST00000613795 SEMA6AQ9H2E6 1030 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 EHD1Q9H4M9 534 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 PCDH12Q9NPG4 1184 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 PCDHA3Q9Y5H8 950 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 SLC30A1Q9Y6M5 507 aa7.02□□□□□ -1.29
CLCN3-211ENST00000613795 FAM95CA0A1B0GW59 222 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 NDUFS3O75489 264 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 PROSCO94903 275 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ASLP04424 464 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 PRKAR1AP10644 381 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 VDRP11473 427 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 MAPK1P28482 360 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 RFX5P48382 616 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 CASP4P49662 377 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ANTXR2P58335 489 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ZNF284Q2VY69 593 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 WDR72Q3MJ13 1102 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ATP6AP1LQ52LC2 224 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 PIGWQ7Z7B1 504 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 SLCO6A1Q86UG4 719 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ZDHHC17Q8IUH5 632 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ZDHHC15Q96MV8 337 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 PIGUQ9H490 435 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ITGA11Q9UKX5 1188 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 DRG1Q9Y295 367 aaKnown RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 A0A1W2PQ72 361 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 FAM205CA6NFA0 338 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 SUPT3HB4E1H0 165 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 INPP4BO15327 924 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 GJB6O95452 261 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 NADKO95544 446 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 HLA-DRAP01903 254 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 MSH3P20585 1137 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 MAPK10P53779 464 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 ABATP80404 500 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 SLC25A3Q00325 362 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 HIST2H2ACQ16777 129 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 TTLL9Q3SXZ7 439 aa7.01□□□□□ -1.29
CLCN3-211ENST00000613795 N4BP2L1Q5TBK1 243 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-211ENST00000613795 GRTP1Q5TC63 336 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms