RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 SRGAP2O75044 1071 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 LUC7L3O95232 432 aaKnown RBP17.14■□□□□ 0.33
IRF1-211ENST00000613424 CHRM1P11229 460 aaPredicted RBP17.14■□□□□ 0.33
IRF1-211ENST00000613424 CD70P32970 193 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 TIE1P35590 1138 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 MAGEA1P43355 309 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 MRPS21P82921 87 aaKnown RBP17.14■□□□□ 0.33
IRF1-211ENST00000613424 SCAPQ12770 1279 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 PIGHQ14442 188 aaPredicted RBP17.14■□□□□ 0.33
IRF1-211ENST00000613424 ACAP1Q15027 740 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 FSCBQ5H9T9 825 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 TTC39BQ5VTQ0 682 aaPredicted RBP17.14■□□□□ 0.33
IRF1-211ENST00000613424 ANKS1BQ7Z6G8 1248 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 KIAA0907Q7Z7F0 614 aaPredicted RBP17.14■□□□□ 0.33
IRF1-211ENST00000613424 CCDC117Q8IWD4 279 aaPredicted RBP17.14■□□□□ 0.33
IRF1-211ENST00000613424 CCAR2Q8N163 923 aaKnown RBP17.14■□□□□ 0.33
IRF1-211ENST00000613424 ZNF557Q8N988 423 aaPredicted RBP17.14■□□□□ 0.33
IRF1-211ENST00000613424 ZNF564Q8TBZ8 553 aaPredicted RBP17.14■□□□□ 0.33
IRF1-211ENST00000613424 LMLNQ96KR4 655 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 EIF3CQ99613 913 aaKnown RBP17.14■□□□□ 0.33
IRF1-211ENST00000613424 BAG1Q99933 345 aaPredicted RBP17.14■□□□□ 0.33
IRF1-211ENST00000613424 C2orf42Q9NWW7 574 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 UVRAGQ9P2Y5 699 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 OR12D3Q9UGF7 316 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 IP6K2Q9UHH9 426 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 GGA2Q9UJY4 613 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 HCN2Q9UL51 889 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 INTUQ9ULD6 942 aa17.14■□□□□ 0.33
IRF1-211ENST00000613424 WDFY4Q6ZS81 3184 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 IGLV3-10A0A075B6K4 115 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 A0A1B0GVM2 712 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 TCAF2A6NFQ2 919 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 FAM72CH0Y354 149 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 ATG13O75143 517 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 LRCH4O75427 683 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 CNTN5O94779 1100 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 NDUFA10O95299 355 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 MIPP30301 263 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 AIF1P55008 147 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 CDH4P55283 916 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 NRG1Q02297 640 aaPredicted RBP17.13■□□□□ 0.33
IRF1-211ENST00000613424 LMAN2Q12907 356 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 CDH18Q13634 790 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 SPA17Q15506 151 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 FAM72AQ5TYM5 149 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 DAB2IPQ5VWQ8 1189 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 TMEM215Q68D42 235 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 FAM72DQ6L9T8 149 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 RAD9BQ6WBX8 426 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 FAM72BQ86X60 149 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 TMEM139Q8IV31 216 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 PYROXD2Q8N2H3 581 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.13■□□□□ 0.33
IRF1-211ENST00000613424 SLC35G2Q8TBE7 412 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 NCAPGQ9BPX3 1015 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 OSGEPQ9NPF4 335 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 ZDHHC4Q9NPG8 344 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 ELOVL2Q9NXB9 296 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 MPP6Q9NZW5 540 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 PCSK1NQ9UHG2 260 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 PCDHA13Q9Y5I0 950 aa17.13■□□□□ 0.33
IRF1-211ENST00000613424 LAMTOR5O43504 91 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 TIMM44O43615 452 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 CLDN11O75508 207 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 PABPC1P11940 636 aaKnown RBP17.12■□□□□ 0.33
IRF1-211ENST00000613424 PCK1P35558 622 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 CXCL12P48061 93 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 GSDMDP57764 484 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 SATB1Q01826 763 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 ALFQ53S48 1182 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 EFHC2Q5JST6 749 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 ERMARDQ5T6L9 678 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 CHST9Q7L1S5 443 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 ADIPOR2Q86V24 386 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 MAML2Q8IZL2 1156 aaPredicted RBP17.12■□□□□ 0.33
IRF1-211ENST00000613424 CCDC33Q8N5R6 958 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 ALLCQ8N6M5 410 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 ZNF513Q8N8E2 541 aaPredicted RBP17.12■□□□□ 0.33
IRF1-211ENST00000613424 NIPA2Q8N8Q9 360 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 IL17RCQ8NAC3 791 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 KCNV2Q8TDN2 545 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 WFIKKN2Q8TEU8 576 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 PEBP4Q96S96 227 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 POLR3BQ9NW08 1133 aaPredicted RBP17.12■□□□□ 0.33
IRF1-211ENST00000613424 KIAA1522Q9P206 1035 aaPredicted RBP17.12■□□□□ 0.33
IRF1-211ENST00000613424 PPARGC1AQ9UBK2 798 aaKnown RBP17.12■□□□□ 0.33
IRF1-211ENST00000613424 CACNA1IQ9P0X4 2223 aa17.12■□□□□ 0.33
IRF1-211ENST00000613424 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.11■□□□□ 0.33
IRF1-211ENST00000613424 PRPSAP2O60256 369 aa17.11■□□□□ 0.33
IRF1-211ENST00000613424 LRIG2O94898 1065 aa17.11■□□□□ 0.33
IRF1-211ENST00000613424 KLF8O95600 359 aaPredicted RBP17.11■□□□□ 0.33
IRF1-211ENST00000613424 CCR3P51677 355 aa17.11■□□□□ 0.33
IRF1-211ENST00000613424 ZNF177Q13360 481 aaPredicted RBP17.11■□□□□ 0.33
IRF1-211ENST00000613424 ANGPT1Q15389 498 aa17.11■□□□□ 0.33
IRF1-211ENST00000613424 MANEALQ5VSG8 457 aa17.11■□□□□ 0.33
IRF1-211ENST00000613424 EGFLAMQ63HQ2 1017 aa17.11■□□□□ 0.33
IRF1-211ENST00000613424 CXorf57Q6NSI4 855 aaKnown RBP17.11■□□□□ 0.33
IRF1-211ENST00000613424 CYP4V2Q6ZWL3 525 aaPredicted RBP17.11■□□□□ 0.33
IRF1-211ENST00000613424 AHI1Q8N157 1196 aa17.11■□□□□ 0.33
IRF1-211ENST00000613424 TXNDC5Q8NBS9 432 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 545 ms