RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 MPPE1Q53F39 396 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 KCNT1Q5JUK3 1230 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 LY6G5CQ5SRR4 150 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 FAM72AQ5TYM5 149 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 FYB2Q5VWT5 728 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 FAM72DQ6L9T8 149 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 RFWD3Q6PCD5 774 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 PEX26Q7Z412 305 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 FAM72BQ86X60 149 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 TMEM25Q86YD3 366 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 RNF135Q8IUD6 432 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 LGI2Q8N0V4 545 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 GJD3Q8N144 294 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 CPA6Q8N4T0 437 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 HSPH1Q92598 858 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 KRT35Q92764 455 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 IGSF8Q969P0 613 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 TMA16Q96EY4 203 aaKnown RBP9.6□□□□□ -0.87
ATF3-210ENST00000613104 HES6Q96HZ4 224 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 ALS2CR12Q96Q35 445 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 SIK2Q9H0K1 926 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 DHX35Q9H5Z1 703 aaKnown RBP9.6□□□□□ -0.87
ATF3-210ENST00000613104 RETREG1Q9H6L5 497 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 BRD9Q9H8M2 597 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 PCDH18Q9HCL0 1135 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 CD320Q9NPF0 282 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 DDX56Q9NY93 547 aaKnown RBP9.6□□□□□ -0.87
ATF3-210ENST00000613104 OR12D3Q9UGF7 316 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 VANGL2Q9ULK5 521 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 DUSP12Q9UNI6 340 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 SORCS3Q9UPU3 1222 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 PCDHA3Q9Y5H8 950 aa9.6□□□□□ -0.87
ATF3-210ENST00000613104 KIAA1549LQ6ZVL6 1849 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 CCDC66A2RUB6 948 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 C3orf70A6NLC5 250 aaPredicted RBP9.59□□□□□ -0.87
ATF3-210ENST00000613104 WASH4PA8MWX3 477 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 MIF4GDA9UHW6 222 aaKnown RBP9.59□□□□□ -0.87
ATF3-210ENST00000613104 TSPAN3O60637 253 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 FTCDO95954 541 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 ADH1CP00326 375 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 CYBBP04839 570 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 ADH5P11766 374 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 KDELR1P24390 212 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 IL4RP24394 825 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 HOXD9P28356 352 aaPredicted RBP9.59□□□□□ -0.87
ATF3-210ENST00000613104 GJC1P36383 396 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 MARCKSL1P49006 195 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 HCAR3P49019 387 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 PEX5P50542 639 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 IRAK1P51617 712 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 RPS24P62847 133 aaKnown RBP9.59□□□□□ -0.87
ATF3-210ENST00000613104 PFKPQ01813 784 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 NR1H3Q13133 447 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 PDK2Q15119 407 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 ITPRIPL2Q3MIP1 535 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 RABGAP1LQ5R372 815 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 MEI1Q5TIA1 1274 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 TTC39BQ5VTQ0 682 aaPredicted RBP9.59□□□□□ -0.87
ATF3-210ENST00000613104 LRRC31Q6UY01 552 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 TPGS1Q6ZTW0 290 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 CHST9Q7L1S5 443 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 NLRP14Q86W24 1093 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 VSIG1Q86XK7 387 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 ETFBKMTQ8IXQ9 262 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 KATNAL2Q8IYT4 538 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 C17orf53Q8N3J3 647 aaPredicted RBP9.59□□□□□ -0.87
ATF3-210ENST00000613104 HJURPQ8NCD3 748 aaPredicted RBP9.59□□□□□ -0.87
ATF3-210ENST00000613104 RAPGEF5Q92565 580 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 TSC1Q92574 1164 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 FAF2Q96CS3 445 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 TBC1D31Q96DN5 1066 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 CHFRQ96EP1 664 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 RPRD1AQ96P16 312 aaPredicted RBP9.59□□□□□ -0.87
ATF3-210ENST00000613104 BBS2Q9BXC9 721 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.59□□□□□ -0.87
ATF3-210ENST00000613104 GTSE1Q9NYZ3 720 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 CWC15Q9P013 229 aaKnown RBP9.59□□□□□ -0.87
ATF3-210ENST00000613104 RCOR3Q9P2K3 495 aaPredicted RBP9.59□□□□□ -0.87
ATF3-210ENST00000613104 ZNF212Q9UDV6 495 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 FBXO10Q9UK96 956 aa9.59□□□□□ -0.87
ATF3-210ENST00000613104 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.59□□□□□ -0.87
ATF3-210ENST00000613104 MIA3Q5JRA6 1907 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 CHD5Q8TDI0 1954 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 A0A1B0GVM2 712 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 TYW5A2RUC4 315 aaKnown RBP9.58□□□□□ -0.88
ATF3-210ENST00000613104 TCAF2A6NFQ2 919 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 ZNF487B1APH4 448 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 NEDD8-MDP1E9PL57 170 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 H3BRJ5 948 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 CREB3O43889 395 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 KIF5CO60282 957 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 CACNG3O60359 315 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 TBL1XO60907 577 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 SRGAP2O75044 1071 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 CNTN5O94779 1100 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 KRT1P04264 644 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 CD48P09326 243 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 TNNT1P13805 278 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 TYRP14679 529 aa9.58□□□□□ -0.88
ATF3-210ENST00000613104 GLULP15104 373 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms