RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 NXPE2Q96DL1 559 aa24.35■■□□□ 1.49
MMP28-203ENST00000612672 LRRC4Q9HBW1 653 aa24.35■■□□□ 1.49
MMP28-203ENST00000612672 STIM2Q9P246 746 aa24.35■■□□□ 1.49
MMP28-203ENST00000612672 SUN2Q9UH99 717 aa24.35■■□□□ 1.49
MMP28-203ENST00000612672 PCDHGA1Q9Y5H4 931 aa24.35■■□□□ 1.49
MMP28-203ENST00000612672 RFPL3O75679 317 aa24.34■■□□□ 1.49
MMP28-203ENST00000612672 ATP5BP06576 529 aaKnown RBP24.34■■□□□ 1.49
MMP28-203ENST00000612672 LCP1P13796 627 aa24.34■■□□□ 1.49
MMP28-203ENST00000612672 DPYDQ12882 1025 aa24.34■■□□□ 1.49
MMP28-203ENST00000612672 TARDBPQ13148 414 aaKnown RBP eCLIP24.34■■□□□ 1.49
MMP28-203ENST00000612672 CST6Q15828 149 aa24.34■■□□□ 1.49
MMP28-203ENST00000612672 HNRNPA1L2Q32P51 320 aaKnown RBP24.34■■□□□ 1.49
MMP28-203ENST00000612672 INAVAQ3KP66 663 aa24.34■■□□□ 1.49
MMP28-203ENST00000612672 FSCBQ5H9T9 825 aa24.34■■□□□ 1.49
MMP28-203ENST00000612672 C9orf64Q5T6V5 341 aa24.34■■□□□ 1.49
MMP28-203ENST00000612672 HES3Q5TGS1 186 aa24.34■■□□□ 1.49
MMP28-203ENST00000612672 AADATQ8N5Z0 425 aa24.34■■□□□ 1.49
MMP28-203ENST00000612672 EID2Q8N6I1 236 aa24.34■■□□□ 1.49
MMP28-203ENST00000612672 GANCQ8TET4 914 aa24.34■■□□□ 1.49
MMP28-203ENST00000612672 TSC1Q92574 1164 aa24.34■■□□□ 1.49
MMP28-203ENST00000612672 FAXDC2Q96IV6 333 aa24.34■■□□□ 1.49
MMP28-203ENST00000612672 IPO9Q96P70 1041 aaKnown RBP24.34■■□□□ 1.49
MMP28-203ENST00000612672 TTC34A8MYJ7 566 aa24.33■■□□□ 1.49
MMP28-203ENST00000612672 O00370 1275 aa24.33■■□□□ 1.49
MMP28-203ENST00000612672 LDOC1O95751 146 aaPredicted RBP24.33■■□□□ 1.49
MMP28-203ENST00000612672 EPHA8P29322 1005 aaPredicted RBP24.33■■□□□ 1.49
MMP28-203ENST00000612672 RGS7P49802 495 aa24.33■■□□□ 1.49
MMP28-203ENST00000612672 RPS24P62847 133 aaKnown RBP24.33■■□□□ 1.49
MMP28-203ENST00000612672 BNIP3Q12983 259 aa24.33■■□□□ 1.49
MMP28-203ENST00000612672 SGO2Q562F6 1265 aa24.33■■□□□ 1.49
MMP28-203ENST00000612672 FBXL19Q6PCT2 694 aa24.33■■□□□ 1.49
MMP28-203ENST00000612672 MMAAQ8IVH4 418 aaKnown RBP24.33■■□□□ 1.49
MMP28-203ENST00000612672 MFN1Q8IWA4 741 aa24.33■■□□□ 1.49
MMP28-203ENST00000612672 SMYD4Q8IYR2 804 aaPredicted RBP24.33■■□□□ 1.49
MMP28-203ENST00000612672 GUF1Q8N442 669 aaKnown RBP24.33■■□□□ 1.49
MMP28-203ENST00000612672 ENGASEQ8NFI3 743 aa24.33■■□□□ 1.49
MMP28-203ENST00000612672 SLC39A7Q92504 469 aa24.33■■□□□ 1.49
MMP28-203ENST00000612672 ZSWIM1Q9BR11 485 aa24.33■■□□□ 1.49
MMP28-203ENST00000612672 DNAI2Q9GZS0 605 aa24.33■■□□□ 1.49
MMP28-203ENST00000612672 ABCC13Q9NSE7 274 aa24.33■■□□□ 1.49
MMP28-203ENST00000612672 DFNA5O60443 496 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 ACSL4O60488 711 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 CALCAP01258 141 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 JUPP14923 745 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 SLC8A3P57103 927 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 PPP2CBP62714 309 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 PPP2CAP67775 309 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 CUL2Q13617 745 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 MPP7Q5T2T1 576 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 KANSL1Q7Z3B3 1105 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 SIX6OS1Q8N1H7 587 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 TTC39CQ8N584 583 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 KCTD13Q8WZ19 329 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 TFAP2BQ92481 460 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 FAM129BQ96TA1 746 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 AASDHPPTQ9NRN7 309 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 ADAMTS1Q9UHI8 967 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 NCKAP1Q9Y2A7 1128 aa24.32■■□□□ 1.48
MMP28-203ENST00000612672 ATXN7O15265 892 aaPredicted RBP24.31■■□□□ 1.48
MMP28-203ENST00000612672 RNASEH2AO75792 299 aaKnown RBP24.31■■□□□ 1.48
MMP28-203ENST00000612672 MYL1P05976 194 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 ITGAVP06756 1048 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 CD19P15391 556 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 ABCB4P21439 1286 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 CMA1P23946 247 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 CD38P28907 300 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 NUMBP49757 651 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 NDUFA8P51970 172 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 METAP1P53582 386 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 C6orf118Q5T5N4 469 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 PMF1Q6P1K2 205 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 PCSK4Q6UW60 755 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 OR2T34Q8NGX1 318 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 FIBINQ8TAL6 211 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 FCRL2Q96LA5 508 aaPredicted RBP24.31■■□□□ 1.48
MMP28-203ENST00000612672 NUCKS1Q9H1E3 243 aaKnown RBP24.31■■□□□ 1.48
MMP28-203ENST00000612672 CNGB3Q9NQW8 809 aa24.31■■□□□ 1.48
MMP28-203ENST00000612672 PSMD8P48556 350 aa24.3■■□□□ 1.48
MMP28-203ENST00000612672 ADPRHP54922 357 aa24.3■■□□□ 1.48
MMP28-203ENST00000612672 NXPH1P58417 271 aa24.3■■□□□ 1.48
MMP28-203ENST00000612672 SFMBT2Q5VUG0 894 aa24.3■■□□□ 1.48
MMP28-203ENST00000612672 SPATS2Q86XZ4 545 aaKnown RBP24.3■■□□□ 1.48
MMP28-203ENST00000612672 SCML4Q8N228 414 aa24.3■■□□□ 1.48
MMP28-203ENST00000612672 CAAP1Q9H8G2 361 aa24.3■■□□□ 1.48
MMP28-203ENST00000612672 HESX1Q9UBX0 185 aa24.3■■□□□ 1.48
MMP28-203ENST00000612672 XPO7Q9UIA9 1087 aaKnown RBP24.3■■□□□ 1.48
MMP28-203ENST00000612672 SLCO3A1Q9UIG8 710 aa24.3■■□□□ 1.48
MMP28-203ENST00000612672 SCML1Q9UN30 329 aa24.3■■□□□ 1.48
MMP28-203ENST00000612672 ERVW-1Q9UQF0 538 aa24.3■■□□□ 1.48
MMP28-203ENST00000612672 FYNP06241 537 aa24.29■■□□□ 1.48
MMP28-203ENST00000612672 RPL13P26373 211 aaKnown RBP24.29■■□□□ 1.48
MMP28-203ENST00000612672 SLC8A1P32418 973 aa24.29■■□□□ 1.48
MMP28-203ENST00000612672 HNF1BP35680 557 aa24.29■■□□□ 1.48
MMP28-203ENST00000612672 C19orf57Q0VDD7 668 aa24.29■■□□□ 1.48
MMP28-203ENST00000612672 ARID5BQ14865 1188 aa24.29■■□□□ 1.48
MMP28-203ENST00000612672 RTP5Q14D33 572 aa24.29■■□□□ 1.48
MMP28-203ENST00000612672 PITRM1Q5JRX3 1037 aa24.29■■□□□ 1.48
MMP28-203ENST00000612672 ATL3Q6DD88 541 aa24.29■■□□□ 1.48
MMP28-203ENST00000612672 CFAP52Q8N1V2 620 aa24.29■■□□□ 1.48
MMP28-203ENST00000612672 STK40Q8N2I9 435 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms