RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 DMGDHQ9UI17 866 aaKnown RBP13.34□□□□□ -0.27
USP6NL-205ENST00000609104 PPIEQ9UNP9 301 aaKnown RBP13.34□□□□□ -0.27
USP6NL-205ENST00000609104 IQGAP3Q86VI3 1631 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 CAMTA2O94983 1202 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 EGFRP00533 1210 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 OR1E1P30953 314 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 PKNOX1P55347 436 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 ADIGQ0VDE8 80 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 DGCR6Q14129 220 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 ACTL9Q8TC94 416 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 C1orf50Q9BV19 199 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 DCLK3Q9C098 648 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 GANQ9H2C0 597 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 HMG20AQ9NP66 347 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 ARHGAP20Q9P2F6 1191 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 HLA-DQA2P01906 255 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 KRT6AP02538 564 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 GZMAP12544 262 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 GARTP22102 1010 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 KRT73Q86Y46 540 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 FAM126BQ8IXS8 530 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 SLC9A8Q9Y2E8 581 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 SF3B1O75533 1304 aaKnown RBP eCLIP13.34□□□□□ -0.272e-6■■■■■ 100.4
USP6NL-205ENST00000609104 ALDH5A1P51649 535 aaPredicted RBP13.34□□□□□ -0.27
USP6NL-205ENST00000609104 PTSQ03393 145 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 XRRA1Q6P2D8 792 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 MFSD7Q6UXD7 560 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 EXOC3L1Q86VI1 746 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 METTL6Q8TCB7 284 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 ANKRD27Q96NW4 1050 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 EPB41L1Q9H4G0 881 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 ZFYVE1Q9HBF4 777 aa13.34□□□□□ -0.27
USP6NL-205ENST00000609104 ZSCAN5CA6NGD5 496 aaPredicted RBP13.33□□□□□ -0.27
USP6NL-205ENST00000609104 SYNCRIPO60506 623 aaKnown RBP13.33□□□□□ -0.27
USP6NL-205ENST00000609104 CKBP12277 381 aa13.33□□□□□ -0.27
USP6NL-205ENST00000609104 RPA3P35244 121 aaPredicted RBP13.33□□□□□ -0.27
USP6NL-205ENST00000609104 MARC1Q5VT66 337 aa13.33□□□□□ -0.27
USP6NL-205ENST00000609104 TMC3Q7Z5M5 1100 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 CGRRF1Q99675 332 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 GSTM5P46439 218 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 CTXN3Q4LDR2 81 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 SETD9Q8NE22 299 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 ADPRHL2Q9NX46 363 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 POLR1DQ9Y2S0 133 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 PSMD11O00231 422 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 ETS1P14921 441 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 IFNGR2P38484 337 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 NR2C2P49116 596 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 PDIA6Q15084 440 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 APBB2Q92870 758 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 SUPT20HL2P0C7V6 817 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 MRPS22P82650 360 aaKnown RBP13.33□□□□□ -0.28
USP6NL-205ENST00000609104 SNTG2Q9NY99 539 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 BCLAF3A2AJT9 711 aaKnown RBP13.33□□□□□ -0.28
USP6NL-205ENST00000609104 B3GNT6Q6ZMB0 384 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 ALKQ9UM73 1620 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 A0A096LPK6 155 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 RGS14O43566 566 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 HPCAL1P37235 193 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 TOB1P50616 345 aaPredicted RBP13.33□□□□□ -0.28
USP6NL-205ENST00000609104 BOP1Q14137 746 aaKnown RBP13.33□□□□□ -0.28
USP6NL-205ENST00000609104 WDR49Q8IV35 697 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 APOPT1Q96IL0 206 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 DDX43Q9NXZ2 648 aaKnown RBP13.33□□□□□ -0.28
USP6NL-205ENST00000609104 DSEQ9UL01 958 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 A2ML1A8K2U0 1454 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 OR6A2O95222 327 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 LSM8O95777 96 aaKnown RBP13.33□□□□□ -0.28
USP6NL-205ENST00000609104 RXRGP48443 463 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 GPR15P49685 360 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 CROCCP3Q8IVE0 287 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 MAGEE2Q8TD90 523 aaPredicted RBP13.33□□□□□ -0.28
USP6NL-205ENST00000609104 DEFB129Q9H1M3 183 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 PLA2G4CQ9UP65 541 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 GOLGA4Q13439 2230 aaKnown RBP13.33□□□□□ -0.28
USP6NL-205ENST00000609104 NCAM2O15394 837 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 AKAP3O75969 853 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 PRKAA2P54646 552 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 BTN2A1Q7KYR7 527 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 ZNF720Q7Z2F6 126 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 NT5DC4Q86YG4 428 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 LPCAT1Q8NF37 534 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 ANKRD6Q9Y2G4 727 aa13.33□□□□□ -0.28
USP6NL-205ENST00000609104 RD3Q7Z3Z2 195 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 CD3EAPO15446 510 aaKnown RBP13.32□□□□□ -0.28
USP6NL-205ENST00000609104 KCNH1O95259 989 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 BMP10O95393 424 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 GP5P40197 560 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 TRIM28Q13263 835 aaKnown RBP13.32□□□□□ -0.28
USP6NL-205ENST00000609104 ATXN2LQ8WWM7 1075 aaKnown RBP13.32□□□□□ -0.28
USP6NL-205ENST00000609104 TOR4AQ9NXH8 423 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 TAS2R13Q9NYV9 303 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 GSTK1Q9Y2Q3 226 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 PCDHA3Q9Y5H8 950 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 PTPAQ15257 358 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 C16orf46Q6P387 395 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 CD302Q8IX05 232 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 ACTRT2Q8TDY3 377 aa13.32□□□□□ -0.28
USP6NL-205ENST00000609104 YME1L1Q96TA2 773 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms