RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 STX16-NPEPL1H3BU86 382 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 H3BUI4 141 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 ASNA1O43681 348 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 KRT5P13647 590 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 WEE1P30291 646 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 SERPINB1P30740 379 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 EIF2B5Q13144 721 aaKnown RBP12.87□□□□□ -0.35
CTCFL-218ENST00000608440 KCTD8Q6ZWB6 473 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 OTOP3Q7RTS5 596 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 SLC4A11Q8NBS3 891 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 ZUFSPQ96AP4 578 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 SH3YL1Q96HL8 342 aaPredicted RBP12.87□□□□□ -0.35
CTCFL-218ENST00000608440 ZNF778Q96MU6 729 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 CITED4Q96RK1 184 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 ZNF347Q96SE7 839 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 DHRS9Q9BPW9 319 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 WDR83Q9BRX9 315 aaKnown RBP12.87□□□□□ -0.35
CTCFL-218ENST00000608440 UCKL1Q9NWZ5 548 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 PPP1R1BQ9UD71 204 aaPredicted RBP12.87□□□□□ -0.35
CTCFL-218ENST00000608440 SERPINB13Q9UIV8 391 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 SNX13Q9Y5W8 968 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 HTRA2O43464 458 aaPredicted RBP12.87□□□□□ -0.35
CTCFL-218ENST00000608440 SCO2O43819 266 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 MFN2O95140 757 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 CYP1A2P05177 515 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 CKMT2P17540 419 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 CYP2J2P51589 502 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 BASP1P80723 227 aaKnown RBP12.87□□□□□ -0.35
CTCFL-218ENST00000608440 SLC18A2Q05940 514 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 KLF1Q13351 362 aaPredicted RBP12.87□□□□□ -0.35
CTCFL-218ENST00000608440 MTX3Q5HYI7 312 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 RNASEH2BQ5TBB1 312 aaKnown RBP12.87□□□□□ -0.35
CTCFL-218ENST00000608440 ANKRD22Q5VYY1 191 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 C16orf46Q6P387 395 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 LYPD8Q6UX82 237 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 TMEM126BQ8IUX1 230 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 ARHGEF19Q8IW93 802 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 SP8Q8IXZ3 490 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 REXO1Q8N1G1 1221 aaKnown RBP12.87□□□□□ -0.35
CTCFL-218ENST00000608440 BPIFB6Q8NFQ5 453 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 C8orf48Q96LL4 319 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 TMEM117Q9H0C3 514 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 DNAJC28Q9NX36 388 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 ATAD5Q96QE3 1844 aa12.87□□□□□ -0.35
CTCFL-218ENST00000608440 CACNA1SQ13698 1873 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 MEIS1O00470 390 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 PDXKO00764 312 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 GAS7O60861 476 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 MTA2O94776 668 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 GH2P01242 217 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 KRT3P12035 628 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 ACAT1P24752 427 aaKnown RBP12.86□□□□□ -0.35
CTCFL-218ENST00000608440 HOXA7P31268 230 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-218ENST00000608440 SERPINB5P36952 375 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 YAP1P46937 504 aaKnown RBP12.86□□□□□ -0.35
CTCFL-218ENST00000608440 ATP6V0D1P61421 351 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 RPS6P62753 249 aaKnown RBP12.86□□□□□ -0.35
CTCFL-218ENST00000608440 ZNF846Q147U1 533 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 MORF4L2Q15014 288 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 SH2D5Q6ZV89 423 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 CTAGE3PQ8IX95 158 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 BEND7Q8N7W2 519 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-218ENST00000608440 TERB1Q8NA31 727 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 ABHD11Q8NFV4 315 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 TP53INP1Q96A56 240 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 NSUN4Q96CB9 384 aaKnown RBP12.86□□□□□ -0.35
CTCFL-218ENST00000608440 MRPL9Q9BYD2 267 aaKnown RBP12.86□□□□□ -0.35
CTCFL-218ENST00000608440 AS3MTQ9HBK9 375 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 MAGEE1Q9HCI5 957 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 USTQ9Y2C2 406 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 PLLPQ9Y342 182 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 BOLA1Q9Y3E2 137 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 LRRC37AA6NMS7 1700 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 SNTNA6NMZ2 147 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 HADHAP40939 763 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 PRKAA2P54646 552 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 MRPS5P82675 430 aaKnown RBP12.86□□□□□ -0.35
CTCFL-218ENST00000608440 MYL7Q01449 175 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 SLC13A2Q13183 592 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 BMPR2Q13873 1038 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 COG2Q14746 738 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 CCDC142Q17RM4 750 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 RSBN1Q5VWQ0 802 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-218ENST00000608440 IQSEC1Q6DN90 963 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 SLC47A2Q86VL8 602 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 TOR1AIP2Q8NFQ8 470 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 PIWIL2Q8TC59 973 aaKnown RBP12.86□□□□□ -0.35
CTCFL-218ENST00000608440 SERPINI1Q99574 410 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 EPS8L2Q9H6S3 715 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 RMND5AQ9H871 391 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 PNPOQ9NVS9 261 aa12.86□□□□□ -0.35
CTCFL-218ENST00000608440 SGK1O00141 431 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 CALCAP01258 141 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 ENO3P13929 434 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-218ENST00000608440 ATF7P17544 494 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-218ENST00000608440 PRKACAP17612 351 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 OCA2Q04671 838 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 CDK18Q07002 472 aa12.85□□□□□ -0.35
CTCFL-218ENST00000608440 CIAPIN1Q6FI81 312 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms