RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 ADPRHP54922 357 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 NOTCH2Q04721 2471 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SRSF1Q07955 248 aaKnown RBP eCLIP12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 KNOP1Q1ED39 458 aaKnown RBP12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ADGRF1Q5T601 910 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 KIAA1614Q5VZ46 1190 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 PIGZQ86VD9 579 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 LSMEM2Q8N112 164 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 AADATQ8N5Z0 425 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 OR14C36Q8NHC7 312 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 GOLGA5Q8TBA6 731 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 NDRG1Q92597 394 aaKnown RBP12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 DHX58Q96C10 678 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 MYO19Q96H55 970 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 MS4A3Q96HJ5 214 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 DEPDC7Q96QD5 511 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 NIF3L1Q9GZT8 377 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 APOBEC3GQ9HC16 384 aaKnown RBP12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SLC39A2Q9NP94 309 aa12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 HBS1LQ9Y450 684 aaKnown RBP12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TLN1Q9Y490 2541 aaKnown RBP12.24□□□□□ -0.45
PDLIM1P1-201ENST00000604187 BOD1L1Q8NFC6 3051 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 MSI1O43347 362 aaKnown RBP12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 OPA1O60313 960 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TBL1XO60907 577 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CSO75390 466 aaKnown RBP12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ZBED1O96006 694 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CASP1P29466 404 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CSKP41240 450 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 LSSP48449 732 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TKTL1P51854 596 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ERVPABLB-1P60509 514 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 AMPD3Q01432 767 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ZNF211Q13398 564 aaPredicted RBP12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ZNF394Q53GI3 561 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 C9orf64Q5T6V5 341 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CDCP2Q5VXM1 449 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CNNM4Q6P4Q7 775 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 RFWD3Q6PCD5 774 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 UNC13DQ70J99 1090 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 MFSD2AQ8NA29 543 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 RNF139Q8WU17 664 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SNRNP27Q8WVK2 155 aaKnown RBP12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 EDEM1Q92611 657 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 VCPIP1Q96JH7 1222 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 MRGPRX3Q96LB0 322 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 HEXIM2Q96MH2 286 aaKnown RBP12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 DPH1Q9BZG8 443 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ULBP1Q9BZM6 244 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 IMPG2Q9BZV3 1241 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CUEDC2Q9H467 287 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 POLR1BQ9H9Y6 1135 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CYP3A43Q9HB55 503 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ASCL3Q9NQ33 180 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 THSD1Q9NS62 852 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SFMBT1Q9UHJ3 866 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TPX2Q9ULW0 747 aaKnown RBP12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 HEMK1Q9Y5R4 338 aaPredicted RBP12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 CKAP5Q14008 2032 aa12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 USP9XQ93008 2570 aaPredicted RBP12.23□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SHROOM3Q8TF72 1996 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TBC1D3DA0A087WVF3 549 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TBC1D3IA0A087WXS9 549 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TBC1D3EA0A087X179 549 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TBC1D3KA0A087X1G2 549 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 A0A1B0GVM2 712 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TBC1D3FA6NER0 549 aaPredicted RBP12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TTC34A8MYJ7 566 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TBC1D3LB9A6J9 549 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 FFAR2O15552 330 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 LATO43561 262 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 LATS1O95835 1130 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SLFN14P0C7P3 912 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TBC1D3HP0C7X1 549 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 GOT1P17174 413 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 MAT2AP31153 395 aaKnown RBP12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SLC39A14Q15043 492 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 HS1BP3Q53T59 392 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 RAB41Q5JT25 222 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 MPP7Q5T2T1 576 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TBC1D3GQ6DHY5 549 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TBC1D3CQ6IPX1 549 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SND1Q7KZF4 910 aaKnown RBP eCLIP12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 BHLHA9Q7RTU4 235 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TMC6Q7Z403 805 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 IQCHQ86VS3 1027 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 MFN1Q8IWA4 741 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TBC1D3Q8IZP1 549 aaPredicted RBP12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 SLC25A45Q8N413 288 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 TTC17Q96AE7 1141 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 USP28Q96RU2 1077 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 C7orf25Q9BPX7 421 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 BACH2Q9BYV9 841 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 DNAI2Q9GZS0 605 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 BLZF1Q9H2G9 400 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 OLA1Q9NTK5 396 aaKnown RBP12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 STIM2Q9P246 746 aa12.22□□□□□ -0.45
PDLIM1P1-201ENST00000604187 GOLGA6L7A0A1B0GV03 622 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 K7ENP7 123 aa12.21□□□□□ -0.45
PDLIM1P1-201ENST00000604187 ADH1BP00325 375 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms