RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 PPARGC1AQ9UBK2 798 aaKnown RBP14.33□□□□□ -0.12
RNF40-212ENST00000602784 VANGL2Q9ULK5 521 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 STARD13Q9Y3M8 1113 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 MIA3Q5JRA6 1907 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 PRPSAP2O60256 369 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 LRCH4O75427 683 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 LUC7L3O95232 432 aaKnown RBP14.32□□□□□ -0.12
RNF40-212ENST00000602784 MIPP30301 263 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 L1CAMP32004 1257 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 HADHBP55084 474 aaKnown RBP14.32□□□□□ -0.12
RNF40-212ENST00000602784 MRPS21P82921 87 aaKnown RBP14.32□□□□□ -0.12
RNF40-212ENST00000602784 KDSRQ06136 332 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 GSE1Q14687 1217 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 E2F5Q15329 346 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 HSF5Q4G112 596 aaPredicted RBP14.32□□□□□ -0.12
RNF40-212ENST00000602784 BOLA3Q53S33 107 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 EFHC2Q5JST6 749 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 MANEALQ5VSG8 457 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 ANKS1BQ7Z6G8 1248 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 MFN1Q8IWA4 741 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 CFAP52Q8N1V2 620 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 ANP32BQ92688 251 aaKnown RBP14.32□□□□□ -0.12
RNF40-212ENST00000602784 IGSF8Q969P0 613 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 LMLNQ96KR4 655 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 CALR3Q96L12 384 aaKnown RBP14.32□□□□□ -0.12
RNF40-212ENST00000602784 STIM2Q9P246 746 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 FZD10Q9ULW2 581 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 CLEC4EQ9ULY5 219 aa14.32□□□□□ -0.12
RNF40-212ENST00000602784 A0A0A6YYK5 440 aaPredicted RBP14.31□□□□□ -0.12
RNF40-212ENST00000602784 CHURC1-FNTBB4DL54 471 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 E9PAM4 449 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 NPC1O15118 1278 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 TRIM24O15164 1050 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 ATG13O75143 517 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 PROSCO94903 275 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 CHRM1P11229 460 aaPredicted RBP14.31□□□□□ -0.12
RNF40-212ENST00000602784 HLA-FP30511 346 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 MAN1A1P33908 653 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 HTR7P34969 479 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 KIR2DL1P43626 348 aaPredicted RBP14.31□□□□□ -0.12
RNF40-212ENST00000602784 ZNF135P52742 658 aaPredicted RBP14.31□□□□□ -0.12
RNF40-212ENST00000602784 CDH4P55283 916 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 KRT83P78385 493 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 SLC12A1Q13621 1099 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 CDH18Q13634 790 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 EIF4HQ15056 248 aaKnown RBP14.31□□□□□ -0.12
RNF40-212ENST00000602784 ERMARDQ5T6L9 678 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 CYP4V2Q6ZWL3 525 aaPredicted RBP14.31□□□□□ -0.12
RNF40-212ENST00000602784 CCAR2Q8N163 923 aaKnown RBP14.31□□□□□ -0.12
RNF40-212ENST00000602784 SPEM1Q8N4L4 309 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 DTWD2Q8NBA8 298 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 WFIKKN2Q8TEU8 576 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 USP33Q8TEY7 942 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 PPP1R9BQ96SB3 815 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 ZYG11BQ9C0D3 744 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 OSGEPQ9NPF4 335 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 RBM12Q9NTZ6 932 aaKnown RBP14.31□□□□□ -0.12
RNF40-212ENST00000602784 KIAA1522Q9P206 1035 aaPredicted RBP14.31□□□□□ -0.12
RNF40-212ENST00000602784 USP18Q9UMW8 372 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 TBC1D30Q9Y2I9 924 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 ZNF318Q5VUA4 2279 aa14.31□□□□□ -0.12
RNF40-212ENST00000602784 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.3□□□□□ -0.12
RNF40-212ENST00000602784 BTNL10A8MVZ5 291 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 PRRT4C9JH25 899 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 H0Y626 953 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 SRGAP2O75044 1071 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 RNF40O75150 1001 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 PABPC1P11940 636 aaKnown RBP14.3□□□□□ -0.12
RNF40-212ENST00000602784 PLK1P53350 603 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 SEMA3BQ13214 749 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 ZNF177Q13360 481 aaPredicted RBP14.3□□□□□ -0.12
RNF40-212ENST00000602784 DMC1Q14565 340 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 SETD3Q86TU7 594 aaPredicted RBP14.3□□□□□ -0.12
RNF40-212ENST00000602784 SFTPA1Q8IWL2 248 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 LRRC8AQ8IWT6 810 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 AHI1Q8N157 1196 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 TXLNBQ8N3L3 684 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 CARNMT1Q8N4J0 409 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 WFDC5Q8TCV5 224 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 TEKT4Q8WW24 435 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 BTBD6Q96KE9 485 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 PEBP4Q96S96 227 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 ABCB8Q9NUT2 735 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 ELOVL2Q9NXB9 296 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 PCSK1NQ9UHG2 260 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 GGA2Q9UJY4 613 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 REXO2Q9Y3B8 237 aaKnown RBP14.3□□□□□ -0.12
RNF40-212ENST00000602784 SNX10Q9Y5X0 201 aa14.3□□□□□ -0.12
RNF40-212ENST00000602784 FAM72CH0Y354 149 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 PJA2O43164 708 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 ARHGAP6O43182 974 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 LRIG2O94898 1065 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 HNRNPLP14866 589 aaKnown RBP eCLIP14.29□□□□□ -0.12
RNF40-212ENST00000602784 RHOQP17081 205 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 HOXC13P31276 330 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 CD70P32970 193 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 GGCXP38435 758 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 HCAR3P49019 387 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 IRAK1P51617 712 aa14.29□□□□□ -0.12
RNF40-212ENST00000602784 VAV2P52735 878 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms