RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SART1O43290 800 aaKnown RBP13.64□□□□□ -0.23
RPS28-204ENST00000602140 ASLP04424 464 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 RPL34P49207 117 aaKnown RBP13.64□□□□□ -0.23
RPS28-204ENST00000602140 STX17P56962 302 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 NNTQ13423 1086 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 CDH18Q13634 790 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 BECN1Q14457 450 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 FSCBQ5H9T9 825 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 MS4A13Q5J8X5 152 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 SYPL2Q5VXT5 272 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 DENND1BQ6P3S1 775 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 FOXR2Q6PJQ5 311 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 LAYNQ6UX15 382 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 DBX2Q6ZNG2 339 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 MMS22LQ6ZRQ5 1243 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 TAC4Q86UU9 113 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 CCDC117Q8IWD4 279 aaPredicted RBP13.64□□□□□ -0.23
RPS28-204ENST00000602140 GANCQ8TET4 914 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 INTS2Q9H0H0 1204 aaKnown RBP13.64□□□□□ -0.23
RPS28-204ENST00000602140 RSPH9Q9H1X1 276 aaPredicted RBP13.64□□□□□ -0.23
RPS28-204ENST00000602140 SGK2Q9HBY8 427 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 CNTN6Q9UQ52 1028 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 NCKAP1Q9Y2A7 1128 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 PCDHGB2Q9Y5G2 931 aa13.64□□□□□ -0.23
RPS28-204ENST00000602140 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.64□□□□□ -0.23
RPS28-204ENST00000602140 NUMA1Q14980 2115 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 FAM47DPA6NHR8 397 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 TAF4O00268 1085 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 KCNK3O14649 394 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 CAPN9O14815 690 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 FLRT2O43155 660 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 SIN3BO75182 1162 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 LETM1O95202 739 aaPredicted RBP13.63□□□□□ -0.23
RPS28-204ENST00000602140 LUC7L3O95232 432 aaKnown RBP13.63□□□□□ -0.23
RPS28-204ENST00000602140 GNA14O95837 355 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 AFPP02771 609 aaKnown RBP13.63□□□□□ -0.23
RPS28-204ENST00000602140 CD27P26842 260 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 ACADSBP45954 432 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 GRIA4P48058 902 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 SCAPQ12770 1279 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 MORC3Q14149 939 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 SUZ12Q15022 739 aaKnown RBP13.63□□□□□ -0.23
RPS28-204ENST00000602140 HNRNPA1L2Q32P51 320 aaKnown RBP13.63□□□□□ -0.23
RPS28-204ENST00000602140 DCAF6Q58WW2 860 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 PITRM1Q5JRX3 1037 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 DHX40Q8IX18 779 aaKnown RBP13.63□□□□□ -0.23
RPS28-204ENST00000602140 LGI2Q8N0V4 545 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 BAHD1Q8TBE0 780 aaPredicted RBP13.63□□□□□ -0.23
RPS28-204ENST00000602140 MRGPRX3Q96LB0 322 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 CDC6Q99741 560 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 SRRTQ9BXP5 876 aaKnown RBP13.63□□□□□ -0.23
RPS28-204ENST00000602140 PABPC3Q9H361 631 aaKnown RBP13.63□□□□□ -0.23
RPS28-204ENST00000602140 UBE2TQ9NPD8 197 aaPredicted RBP13.63□□□□□ -0.23
RPS28-204ENST00000602140 OSGEPQ9NPF4 335 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 FBXL12Q9NXK8 326 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 SERGEFQ9UGK8 458 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 XPO7Q9UIA9 1087 aaKnown RBP13.63□□□□□ -0.23
RPS28-204ENST00000602140 SCML1Q9UN30 329 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 ERVW-1Q9UQF0 538 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 BTBD3Q9Y2F9 522 aa13.63□□□□□ -0.23
RPS28-204ENST00000602140 E5RJQ4 531 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 PAPSS1O43252 624 aaPredicted RBP13.62□□□□□ -0.23
RPS28-204ENST00000602140 MED7O43513 233 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 RNASEH1O60930 286 aaKnown RBP13.62□□□□□ -0.23
RPS28-204ENST00000602140 APOEP02649 317 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 CAPNS1P04632 268 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 IGHV4-34P06331 123 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 ATXN1LP0C7T5 689 aaKnown RBP13.62□□□□□ -0.23
RPS28-204ENST00000602140 CTSOP43234 321 aaPredicted RBP13.62□□□□□ -0.23
RPS28-204ENST00000602140 MARSP56192 900 aaKnown RBP13.62□□□□□ -0.23
RPS28-204ENST00000602140 PAK1Q13153 545 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 CST6Q15828 149 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 ZC3H12AQ5D1E8 599 aaKnown RBP13.62□□□□□ -0.23
RPS28-204ENST00000602140 KCNT1Q5JUK3 1230 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 C9orf64Q5T6V5 341 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 RAP1GAP2Q684P5 730 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 KIAA0895LQ68EN5 471 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 CCNI2Q6ZMN8 369 aaPredicted RBP13.62□□□□□ -0.23
RPS28-204ENST00000602140 USP30Q70CQ3 517 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 BEND5Q7L4P6 421 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 ADAT2Q7Z6V5 191 aaKnown RBP13.62□□□□□ -0.23
RPS28-204ENST00000602140 CHSY1Q86X52 802 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 PROSER1Q86XN7 944 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 MMAAQ8IVH4 418 aaKnown RBP13.62□□□□□ -0.23
RPS28-204ENST00000602140 STK32AQ8WU08 396 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 ZNF606Q8WXB4 792 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 IGSF8Q969P0 613 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 ORAI3Q9BRQ5 295 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 TRIM62Q9BVG3 475 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 SLC4A5Q9BY07 1137 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 TOR4AQ9NXH8 423 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 KIAA1522Q9P206 1035 aaPredicted RBP13.62□□□□□ -0.23
RPS28-204ENST00000602140 CYTH4Q9UIA0 394 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 CEP83Q9Y592 693 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 DSPP15924 2871 aaKnown RBP13.62□□□□□ -0.23
RPS28-204ENST00000602140 FAM208BQ5VWN6 2430 aa13.62□□□□□ -0.23
RPS28-204ENST00000602140 PKD1L2Q7Z442 2459 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 A0A1W2PP55 124 aa13.61□□□□□ -0.23
RPS28-204ENST00000602140 TARSL2A2RTX5 802 aaKnown RBP13.61□□□□□ -0.23
RPS28-204ENST00000602140 GOLGA8CPA6NN73 597 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms