RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 CKAP5Q14008 2032 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 APC2O95996 2303 aa18.5■□□□□ 0.55
SHKBP1-227ENST00000602011 TNFSF14O43557 240 aa18.49■□□□□ 0.55
SHKBP1-227ENST00000602011 GNA14O95837 355 aa18.49■□□□□ 0.55
SHKBP1-227ENST00000602011 SRPRAP08240 638 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-227ENST00000602011 RPL34P49207 117 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-227ENST00000602011 RACK1P63244 317 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-227ENST00000602011 BNC1Q01954 994 aa18.49■□□□□ 0.55
SHKBP1-227ENST00000602011 LRMPQ12912 555 aa18.49■□□□□ 0.55
SHKBP1-227ENST00000602011 HNRNPA1L2Q32P51 320 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-227ENST00000602011 FAM133BQ5BKY9 247 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-227ENST00000602011 PPM1KQ8N3J5 372 aa18.49■□□□□ 0.55
SHKBP1-227ENST00000602011 TFAP2BQ92481 460 aa18.49■□□□□ 0.55
SHKBP1-227ENST00000602011 PPP1R9BQ96SB3 815 aa18.49■□□□□ 0.55
SHKBP1-227ENST00000602011 BICDL2A1A5D9 508 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 LRRC72A6NJI9 287 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 E9PAM4 449 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 M0QYV0 167 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 MSI1O43347 362 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 CCT8P50990 548 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 PMS1P54277 932 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 MTA1Q13330 715 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 SLC12A1Q13621 1099 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 CCDC40Q4G0X9 1142 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 SOWAHCQ53LP3 525 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 KIAA0895LQ68EN5 471 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 ADAT2Q7Z6V5 191 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 PDZD3Q86UT5 571 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 LMLNQ96KR4 655 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 FAM81BQ96LP2 452 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 ACE2Q9BYF1 805 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 PABPC3Q9H361 631 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 SLC12A6Q9UHW9 1150 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 FZD4Q9ULV1 537 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 SLCO1B1Q9Y6L6 691 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 ACACAQ13085 2346 aa18.48■□□□□ 0.55
SHKBP1-227ENST00000602011 SMG1Q96Q15 3661 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 VILLO15195 856 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 MED7O43513 233 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 FSBPO95073 299 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 CD70P32970 193 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 NNMTP40261 264 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 RGS7P49802 495 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 OXCT1P55809 520 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 C21orf59P57076 290 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 CDH18Q13634 790 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 RFWD3Q6PCD5 774 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 EHBP1Q8NDI1 1231 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 GANCQ8TET4 914 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 HNRNPLLQ8WVV9 542 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 SLC39A13Q96H72 371 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 MED15Q96RN5 788 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 GDPD2Q9HCC8 539 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 FBXL12Q9NXK8 326 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 ADAMTS1Q9UHI8 967 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 CNTN6Q9UQ52 1028 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 RAXQ9Y2V3 346 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 SNX11Q9Y5W9 270 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 IGSF10Q6WRI0 2623 aa18.47■□□□□ 0.55
SHKBP1-227ENST00000602011 PTPRBP23467 1997 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 A0A1W2PPC4 97 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 GOLGA8CPA6NN73 597 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 CAPN9O14815 690 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 YKT6O15498 198 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 GABBR2O75899 941 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 SLC6A4P31645 630 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 CSKP41240 450 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 CTSKP43235 329 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 GPD2P43304 727 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 NUCB2P80303 420 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 SULT2A1Q06520 285 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 MS4A13Q5J8X5 152 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 ENOSF1Q7L5Y1 443 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 LMO3Q8TAP4 145 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 FCRL2Q96LA5 508 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 STIM2Q9P246 746 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 NUMA1Q14980 2115 aa18.46■□□□□ 0.55
SHKBP1-227ENST00000602011 EDDM13A0A1B0GTR0 161 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 GOLGA6L7A0A1B0GV03 622 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 TRIM49BA6NDI0 452 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 RNF225M0QZC1 329 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 FGFR1OPO95684 399 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 APOEP02649 317 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 C1SP09871 688 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 ATXN1LP0C7T5 689 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 SLC2A3P11169 496 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 NUDT1P36639 197 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 CCR5P51681 352 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 ECT2LQ008S8 904 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 CST6Q15828 149 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 RNF219Q5W0B1 726 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 SCUBE3Q8IX30 993 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 CARNMT1Q8N4J0 409 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 ZNF366Q8N895 744 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 OR2T34Q8NGX1 318 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 DQX1Q8TE96 717 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 FAM149B1Q96BN6 582 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 MYO19Q96H55 970 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 BTN2A3PQ96KV6 586 aa18.45■□□□□ 0.54
SHKBP1-227ENST00000602011 OMDQ99983 421 aa18.45■□□□□ 0.54
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