RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 DPYSQ14117 519 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 MPPE1Q53F39 396 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 ANKRD20A8PQ5CZ79 823 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 TFDP3Q5H9I0 405 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 MPP7Q5T2T1 576 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 SPOCD1Q6ZMY3 1216 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 CCDC50Q8IVM0 306 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 ATP2A3Q93084 1043 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 MYEOVQ96EZ4 313 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 PBKQ96KB5 322 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 PRICKLE1Q96MT3 831 aaPredicted RBP14.8□□□□□ -0.04
UPF1-211ENST00000600868 RPRD1AQ96P16 312 aaPredicted RBP14.8□□□□□ -0.04
UPF1-211ENST00000600868 ZYG11BQ9C0D3 744 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 CATSPERBQ9H7T0 1116 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 PRDM16Q9HAZ2 1276 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 KCNK12Q9HB15 430 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 SPHK2Q9NRA0 654 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 MARK1Q9P0L2 795 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 STIM2Q9P246 746 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 EFR3BQ9Y2G0 817 aa14.8□□□□□ -0.04
UPF1-211ENST00000600868 TYW5A2RUC4 315 aaKnown RBP14.79□□□□□ -0.04
UPF1-211ENST00000600868 WASH4PA8MWX3 477 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 DAPK3O43293 454 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 TSPAN3O60637 253 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 CYBBP04839 570 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 RHOQP17081 205 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 TCP1P17987 556 aaKnown RBP14.79□□□□□ -0.04
UPF1-211ENST00000600868 EPHB2P29323 1055 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 GDI1P31150 447 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 SGSHP51688 502 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 VCPP55072 806 aaKnown RBP14.79□□□□□ -0.04
UPF1-211ENST00000600868 RPS24P62847 133 aaKnown RBP14.79□□□□□ -0.04
UPF1-211ENST00000600868 ZNF211Q13398 564 aaPredicted RBP14.79□□□□□ -0.04
UPF1-211ENST00000600868 GRM2Q14416 872 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 DHCR24Q15392 516 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 LY6G5CQ5SRR4 150 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 SEL1L2Q5TEA6 688 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 RNF43Q68DV7 783 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 TRIM68Q6AZZ1 485 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 RWDD4Q6NW29 188 aaKnown RBP14.79□□□□□ -0.04
UPF1-211ENST00000600868 RHBDF2Q6PJF5 856 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 CHST9Q7L1S5 443 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 ANKS1BQ7Z6G8 1248 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 NLRP14Q86W24 1093 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 TMEM25Q86YD3 366 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 RSAD2Q8WXG1 361 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 ZFYVE19Q96K21 471 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 RNF157Q96PX1 679 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 OSBPL9Q96SU4 736 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 MAK16Q9BXY0 300 aaKnown RBP14.79□□□□□ -0.04
UPF1-211ENST00000600868 HPS4Q9NQG7 708 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 ARHGEF4Q9NR80 690 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 DONSONQ9NYP3 566 aa14.79□□□□□ -0.04
UPF1-211ENST00000600868 DOCK4Q8N1I0 1966 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 hCG_1818297A0A087WSY0 165 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 ARNTLO00327 626 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 TBL1XO60907 577 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 CLDN11O75508 207 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 ADH1CP00326 375 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 PENKP01210 267 aaPredicted RBP14.78□□□□□ -0.04
UPF1-211ENST00000600868 CYP17A1P05093 508 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 ARSAP15289 507 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 ERCC2P18074 760 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 AMPD1P23109 780 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 CXCR5P32302 372 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 IRAK1P51617 712 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 CDH4P55283 916 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 AMPD2Q01433 879 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 ZP2Q05996 745 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 TFDP2Q14188 446 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 ALFQ53S48 1182 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 FYB2Q5VWT5 728 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 TPGS1Q6ZTW0 290 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 CFAP52Q8N1V2 620 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 SLC44A3Q8N4M1 653 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 PQLC3Q8N755 202 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 PCDH19Q8TAB3 1148 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 DDI1Q8WTU0 396 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 PSMB7Q99436 277 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 OSBPL8Q9BZF1 889 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 EBF3Q9H4W6 596 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 ECT2Q9H8V3 914 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 TMEM248Q9NWD8 314 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 MPP6Q9NZW5 540 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 ZNF212Q9UDV6 495 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 SAR1BQ9Y6B6 198 aa14.78□□□□□ -0.04
UPF1-211ENST00000600868 A0A1B0GVM2 712 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 TCAF2A6NFQ2 919 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 C19orf67A6NJJ6 358 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 DCLK1O15075 740 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 HOXC11O43248 304 aaPredicted RBP14.77□□□□□ -0.05
UPF1-211ENST00000600868 CNTN5O94779 1100 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 BMP1P13497 986 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 KRT10P13645 584 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 ZFXP17010 805 aaPredicted RBP14.77□□□□□ -0.05
UPF1-211ENST00000600868 HOXD9P28356 352 aaPredicted RBP14.77□□□□□ -0.05
UPF1-211ENST00000600868 GAD2Q05329 585 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 NR1H3Q13133 447 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 RUNX3Q13761 415 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 ANO4Q32M45 955 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms