RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 MIPP30301 263 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 KDSRQ06136 332 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 MANEALQ5VSG8 457 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 SCYL2Q6P3W7 929 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 CHST9Q7L1S5 443 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 PSTKQ8IV42 348 aaKnown RBP20.98■□□□□ 0.95
PNKP-211ENST00000598020 CFAP52Q8N1V2 620 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 SLC35G2Q8TBE7 412 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 LMLNQ96KR4 655 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 RETREG1Q9H6L5 497 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 RBM12Q9NTZ6 932 aaKnown RBP20.98■□□□□ 0.95
PNKP-211ENST00000598020 PPARGC1AQ9UBK2 798 aaKnown RBP20.98■□□□□ 0.95
PNKP-211ENST00000598020 OR12D3Q9UGF7 316 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 FZD10Q9ULW2 581 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 ATG2BQ96BY7 2078 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 CHURC1-FNTBB4DL54 471 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 E9PAM4 449 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 CLDN11O75508 207 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 IPO7O95373 1038 aaKnown RBP20.97■□□□□ 0.95
PNKP-211ENST00000598020 HLA-FP30511 346 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 L1CAMP32004 1257 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 GGCXP38435 758 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 EFHC2Q5JST6 749 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 ANKS1BQ7Z6G8 1248 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 MFN1Q8IWA4 741 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 BTBD6Q96KE9 485 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 OSGEPQ9NPF4 335 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 STIM2Q9P246 746 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 SNX10Q9Y5X0 201 aa20.97■□□□□ 0.95
PNKP-211ENST00000598020 TIMM44O43615 452 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 PRPSAP2O60256 369 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 PROSCO94903 275 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 MAN1A1P33908 653 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 ARHGAP25P42331 645 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 KIR2DL1P43626 348 aaPredicted RBP20.96■□□□□ 0.95
PNKP-211ENST00000598020 HADHBP55084 474 aaKnown RBP20.96■□□□□ 0.95
PNKP-211ENST00000598020 CDH4P55283 916 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 MRPS21P82921 87 aaKnown RBP20.96■□□□□ 0.95
PNKP-211ENST00000598020 GAS6Q14393 721 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 EIF4HQ15056 248 aaKnown RBP20.96■□□□□ 0.95
PNKP-211ENST00000598020 ERMARDQ5T6L9 678 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 CYP4V2Q6ZWL3 525 aaPredicted RBP20.96■□□□□ 0.95
PNKP-211ENST00000598020 CCDC117Q8IWD4 279 aaPredicted RBP20.96■□□□□ 0.95
PNKP-211ENST00000598020 CCAR2Q8N163 923 aaKnown RBP20.96■□□□□ 0.95
PNKP-211ENST00000598020 CCDC112Q8NEF3 446 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 WFDC5Q8TCV5 224 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 WFIKKN2Q8TEU8 576 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 USP33Q8TEY7 942 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 USP18Q9UMW8 372 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 REXO2Q9Y3B8 237 aaKnown RBP20.96■□□□□ 0.95
PNKP-211ENST00000598020 CACNA1IQ9P0X4 2223 aa20.96■□□□□ 0.95
PNKP-211ENST00000598020 A0A0A6YYK5 440 aaPredicted RBP20.95■□□□□ 0.94
PNKP-211ENST00000598020 PRRT4C9JH25 899 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 ATG13O75143 517 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 RNF40O75150 1001 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 OXCT1P55809 520 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 SEMA3BQ13214 749 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 CDH18Q13634 790 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 GSE1Q14687 1217 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 GEN1Q17RS7 908 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 HSF5Q4G112 596 aaPredicted RBP20.95■□□□□ 0.94
PNKP-211ENST00000598020 BOLA3Q53S33 107 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 Q6ZS52 159 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 SFTPA1Q8IWL2 248 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 CARNMT1Q8N4J0 409 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 SPEM1Q8N4L4 309 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 DTWD2Q8NBA8 298 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 PEBP4Q96S96 227 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 ABCB8Q9NUT2 735 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 KIAA1522Q9P206 1035 aaPredicted RBP20.95■□□□□ 0.94
PNKP-211ENST00000598020 PCSK1NQ9UHG2 260 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 GGA2Q9UJY4 613 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 TBC1D30Q9Y2I9 924 aa20.95■□□□□ 0.94
PNKP-211ENST00000598020 FAM72CH0Y354 149 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 H0Y626 953 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 SRGAP2O75044 1071 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 CNTN5O94779 1100 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 LRIG2O94898 1065 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 PABPC1P11940 636 aaKnown RBP20.94■□□□□ 0.94
PNKP-211ENST00000598020 HOXC13P31276 330 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 HTR7P34969 479 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 IRAK1P51617 712 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 KRT83P78385 493 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 LMAN2Q12907 356 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 SLC12A1Q13621 1099 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 DMC1Q14565 340 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 E2F5Q15329 346 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 ALFQ53S48 1182 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 FSCBQ5H9T9 825 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 FAM72AQ5TYM5 149 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 FAM72DQ6L9T8 149 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 FAM72BQ86X60 149 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 LRRC8AQ8IWT6 810 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 AHI1Q8N157 1196 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 SNRNP25Q9BV90 132 aaKnown RBP20.94■□□□□ 0.94
PNKP-211ENST00000598020 MAGEB5Q9BZ81 275 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 ZYG11BQ9C0D3 744 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 ZNF212Q9UDV6 495 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 HCN2Q9UL51 889 aa20.94■□□□□ 0.94
PNKP-211ENST00000598020 AP4E1Q9UPM8 1137 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms