RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 STILQ15468 1287 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 CCDC40Q4G0X9 1142 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 COBLL1Q53SF7 1204 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 FAM133BQ5BKY9 247 aaKnown RBP10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 PDZD3Q86UT5 571 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 DHX40Q8IX18 779 aaKnown RBP10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 HJURPQ8NCD3 748 aaPredicted RBP10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 FIBINQ8TAL6 211 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 ERCC4Q92889 916 aaPredicted RBP10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 SMARCE1Q969G3 411 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 SLC35C1Q96A29 364 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 AZIN2Q96A70 460 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 TTC17Q96AE7 1141 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 SKA1Q96BD8 255 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 HSFY1Q96LI6 401 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 GSDMAQ96QA5 445 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 OMDQ99983 421 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 ACE2Q9BYF1 805 aaPredicted RBP10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 RSPH9Q9H1X1 276 aaPredicted RBP10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 PABPC3Q9H361 631 aaKnown RBP10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 METTL14Q9HCE5 456 aaKnown RBP10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 ST7Q9NRC1 585 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 SCML1Q9UN30 329 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 RAXQ9Y2V3 346 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 CEP83Q9Y592 693 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 SPEGQ15772 3267 aa10.96□□□□□ -0.66
CHMP2A-202ENST00000596708 ZFYVE26Q68DK2 2539 aa10.96□□□□□ -0.66
CHMP2A-202ENST00000596708 COL5A1P20908 1838 aaPredicted RBP10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 A0A1W2PP55 124 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 A0A1W2PPC4 97 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 FAM149AA5PLN7 773 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 TRABD2BA6NFA1 517 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 CAPN9O14815 690 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 MID1O15344 667 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 PCDHGA12O60330 932 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 DFNA5O60443 496 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 GABBR2O75899 941 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 FBXO21O94952 628 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 MOCS3O95396 460 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 MOCS2O96007 188 aaPredicted RBP10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 CALCAP01258 141 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 C7P10643 843 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 CTSKP43235 329 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 GALCP54803 685 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 RPS24P62847 133 aaKnown RBP10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 RACK1P63244 317 aaKnown RBP10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 NUCB2P80303 420 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 STIM1Q13586 685 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 CDH18Q13634 790 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 INAVAQ3KP66 663 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 KCNT1Q5JUK3 1230 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 PRAMEF14Q5SWL7 426 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 ISM2Q6H9L7 571 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 NADSYN1Q6IA69 706 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 NCEH1Q6PIU2 408 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 MMS22LQ6ZRQ5 1243 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 USP30Q70CQ3 517 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 RRAGAQ7L523 313 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 MMAAQ8IVH4 418 aaKnown RBP10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 CFAP52Q8N1V2 620 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 KAT5Q92993 513 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 FAM149B1Q96BN6 582 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 MYO19Q96H55 970 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 FCRL2Q96LA5 508 aaPredicted RBP10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 SLC6A18Q96N87 628 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 SERPINB11Q96P15 392 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 NEUROG2Q9H2A3 272 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 AASDHPPTQ9NRN7 309 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 FTSJ1Q9UET6 329 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 INTS6Q9UL03 887 aaKnown RBP10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 ERVW-1Q9UQF0 538 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 NAALADL1Q9UQQ1 740 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 TRPM6Q9BX84 2022 aa10.95□□□□□ -0.66
CHMP2A-202ENST00000596708 ANKRD11Q6UB99 2663 aaPredicted RBP10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 LRRC72A6NJI9 287 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 TTC34A8MYJ7 566 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 PSMA7O14818 248 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 VILLO15195 856 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 RNASEH2AO75792 299 aaKnown RBP10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 DKK1O94907 266 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 IGHV4-34P06331 123 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 ITGAVP06756 1048 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 ABCB4P21439 1286 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 SLC8A1P32418 973 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 CST6Q15828 149 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 HNRNPA1L2Q32P51 320 aaKnown RBP10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 FSCBQ5H9T9 825 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 MS4A13Q5J8X5 152 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 PITRM1Q5JRX3 1037 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 RNF219Q5W0B1 726 aaPredicted RBP10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 DHRS13Q6UX07 377 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 SND1Q7KZF4 910 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 GATAD2AQ86YP4 633 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 SCUBE3Q8IX30 993 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 LGI2Q8N0V4 545 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 FMR1NBQ8N0W7 255 aaPredicted RBP10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 ADAM32Q8TC27 787 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 DQX1Q8TE96 717 aaKnown RBP10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 MYEOVQ96EZ4 313 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 LRIG1Q96JA1 1093 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms